RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SERPINB13Q9UIV8 391 aa29.2■■■□□ 2.27
RFFL-206ENST00000447669 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.2■■■□□ 2.27
RFFL-206ENST00000447669 ERICH2A1L162 156 aa29.2■■■□□ 2.26
RFFL-206ENST00000447669 CTDNEP1O95476 244 aa29.2■■■□□ 2.26
RFFL-206ENST00000447669 LIFRP42702 1097 aa29.2■■■□□ 2.26
RFFL-206ENST00000447669 SART3Q15020 963 aaKnown RBP29.2■■■□□ 2.26
RFFL-206ENST00000447669 CDAN1Q8IWY9 1227 aa29.2■■■□□ 2.26
RFFL-206ENST00000447669 DNAJC18Q9H819 358 aa29.2■■■□□ 2.26
RFFL-206ENST00000447669 CWC22Q9HCG8 908 aaKnown RBP29.2■■■□□ 2.26
RFFL-206ENST00000447669 DDNO94850 711 aaPredicted RBP29.19■■■□□ 2.26
RFFL-206ENST00000447669 FOXD4L5Q5VV16 416 aaPredicted RBP29.19■■■□□ 2.26
RFFL-206ENST00000447669 SGMS1Q86VZ5 419 aa29.19■■■□□ 2.26
RFFL-206ENST00000447669 IQCA1Q86XH1 822 aa29.19■■■□□ 2.26
RFFL-206ENST00000447669 FOXD4L4Q8WXT5 416 aaPredicted RBP29.19■■■□□ 2.26
RFFL-206ENST00000447669 CCDC69A6NI79 296 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 SOCS7O14512 581 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 TSPY3P0CV98 308 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 TSPY8P0CW00 308 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 DPF2Q92785 391 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 DDX11Q96FC9 970 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 HLA-DOAP06340 250 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 TMOD2Q9NZR1 351 aa29.18■■■□□ 2.26
RFFL-206ENST00000447669 CNTNAP1P78357 1384 aa29.17■■■□□ 2.26
RFFL-206ENST00000447669 MYH8P13535 1937 aa29.17■■■□□ 2.26
RFFL-206ENST00000447669 CHMP4CQ96CF2 233 aa29.17■■■□□ 2.26
RFFL-206ENST00000447669 SLC12A7Q9Y666 1083 aa29.17■■■□□ 2.26
RFFL-206ENST00000447669 CDC27P30260 824 aa29.16■■■□□ 2.26
RFFL-206ENST00000447669 SHROOM1Q2M3G4 852 aaPredicted RBP29.16■■■□□ 2.26
RFFL-206ENST00000447669 TMEM39BQ9GZU3 492 aa29.16■■■□□ 2.26
RFFL-206ENST00000447669 SHMT1P34896 483 aa29.16■■■□□ 2.26
RFFL-206ENST00000447669 ADD1P35611 737 aaKnown RBP29.16■■■□□ 2.26
RFFL-206ENST00000447669 IFIT1BQ5T764 474 aaKnown RBP29.16■■■□□ 2.26
RFFL-206ENST00000447669 RCSD1Q6JBY9 416 aa29.16■■■□□ 2.26
RFFL-206ENST00000447669 ZDHHC9Q9Y397 364 aa29.16■■■□□ 2.26
RFFL-206ENST00000447669 ENTPD3O75355 529 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 EPS15P42566 896 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 GPC2Q8N158 579 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 ZBTB43O43298 467 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 NPM3O75607 178 aaKnown RBP29.15■■■□□ 2.26
RFFL-206ENST00000447669 AKR1B1P15121 316 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 NSUN7Q8NE18 718 aaKnown RBP29.15■■■□□ 2.26
RFFL-206ENST00000447669 TRPM4Q8TD43 1214 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 NUP133Q8WUM0 1156 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 DHX36Q9H2U1 1008 aaKnown RBP29.15■■■□□ 2.26
RFFL-206ENST00000447669 PI4KBQ9UBF8 816 aa29.15■■■□□ 2.26
RFFL-206ENST00000447669 MYO1BO43795 1136 aa29.14■■■□□ 2.26
RFFL-206ENST00000447669 METAP2P50579 478 aaKnown RBP eCLIP29.14■■■□□ 2.26
RFFL-206ENST00000447669 CLEC10AQ8IUN9 316 aa29.14■■■□□ 2.26
RFFL-206ENST00000447669 ZNF654Q8IZM8 581 aa29.14■■■□□ 2.26
RFFL-206ENST00000447669 CRACR2BQ8N4Y2 399 aaPredicted RBP29.14■■■□□ 2.26
RFFL-206ENST00000447669 CSRNP1Q96S65 589 aa29.14■■■□□ 2.26
RFFL-206ENST00000447669 FAM217BQ9NTX9 383 aaPredicted RBP29.14■■■□□ 2.26
RFFL-206ENST00000447669 KIF4BQ2VIQ3 1234 aa29.13■■■□□ 2.25
RFFL-206ENST00000447669 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.13■■■□□ 2.25
RFFL-206ENST00000447669 ZNF287Q9HBT7 754 aa29.13■■■□□ 2.25
RFFL-206ENST00000447669 GPRC5DQ9NZD1 345 aa29.13■■■□□ 2.25
RFFL-206ENST00000447669 MTA3Q9BTC8 594 aa29.13■■■□□ 2.25
RFFL-206ENST00000447669 CIZ1Q9ULV3 898 aaPredicted RBP29.13■■■□□ 2.25
RFFL-206ENST00000447669 PTPDC1A2A3K4 754 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 GOLGA8AA7E2F4 631 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 CMTR1Q8N1G2 835 aaKnown RBP29.11■■■□□ 2.25
RFFL-206ENST00000447669 FAM151AQ8WW52 585 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 ATRNL1Q5VV63 1379 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 H7C1D1 291 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 RAB3GAP1Q15042 981 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 TMTC2Q8N394 836 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 EHD4Q9H223 541 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 STX8Q9UNK0 236 aa29.11■■■□□ 2.25
RFFL-206ENST00000447669 SYT1P21579 422 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 FOSBP53539 338 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 NEDD1Q8NHV4 660 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 CEP95Q96GE4 821 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 HACL1Q9UJ83 578 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 MTMR7Q9Y216 660 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 SYNE3Q6ZMZ3 975 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 CHAMP1Q96JM3 812 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 SWAP70Q9UH65 585 aa29.1■■■□□ 2.25
RFFL-206ENST00000447669 HIRAP54198 1017 aaPredicted RBP29.09■■■□□ 2.25
RFFL-206ENST00000447669 CCDC82Q8N4S0 544 aa29.09■■■□□ 2.25
RFFL-206ENST00000447669 SMARCC2Q8TAQ2 1214 aa29.09■■■□□ 2.25
RFFL-206ENST00000447669 TNPO1Q92973 898 aaKnown RBP29.09■■■□□ 2.25
RFFL-206ENST00000447669 MPHOSPH10O00566 681 aaKnown RBP29.08■■■□□ 2.25
RFFL-206ENST00000447669 RRP1BQ14684 758 aaKnown RBP29.08■■■□□ 2.25
RFFL-206ENST00000447669 MIGA2Q7L4E1 593 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 RASGRP2Q7LDG7 609 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 TAOK2Q9UL54 1235 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 UBE2Q2LH0YL09 131 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 FDPSP14324 419 aaKnown RBP29.08■■■□□ 2.25
RFFL-206ENST00000447669 RASA3Q14644 834 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 PHKBQ93100 1093 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 TRIM34Q9BYJ4 488 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 TCP11L1Q9NUJ3 509 aa29.08■■■□□ 2.25
RFFL-206ENST00000447669 CPLX1O14810 134 aa29.07■■■□□ 2.24
RFFL-206ENST00000447669 GDF11O95390 407 aa29.07■■■□□ 2.24
RFFL-206ENST00000447669 TROAPQ12815 778 aa29.07■■■□□ 2.24
RFFL-206ENST00000447669 FOXP4Q8IVH2 680 aaPredicted RBP29.07■■■□□ 2.24
RFFL-206ENST00000447669 JAG1P78504 1218 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 CATIPQ7Z7H3 387 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 FANCBQ8NB91 859 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 TMEM47Q9BQJ4 181 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms