RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 GRM8O00222 908 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 BMP1P13497 986 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 KCNQ1P51787 676 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 ERVK-24P63145 666 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 IDI2Q9BXS1 227 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 CWC22Q9HCG8 908 aaKnown RBP18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 RBPJLQ9UBG7 517 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 MYH2Q9UKX2 1941 aa18.23■□□□□ 0.51
LRPPRC-205ENST00000447246 KBTBD13C9JR72 458 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 APAF1O14727 1248 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 CYP2C19P33261 490 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 TLE2Q04725 743 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 MAP2K5Q13163 448 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 SNX17Q15036 470 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 BEND3Q5T5X7 828 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 UTYO14607 1347 aa18.22■□□□□ 0.51
LRPPRC-205ENST00000447246 MSCO60682 206 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 PDE8BO95263 885 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 MTMR2Q13614 643 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 MICALL1Q8N3F8 863 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 C11orf16Q9NQ32 467 aa18.21■□□□□ 0.51
LRPPRC-205ENST00000447246 ADCYAP1R1P41586 468 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 MRE11P49959 708 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 SH3D19Q5HYK7 790 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 EDC3Q96F86 508 aaKnown RBP18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 WDFY4Q6ZS81 3184 aa18.2■□□□□ 0.5
LRPPRC-205ENST00000447246 FPGSQ05932 587 aa18.19■□□□□ 0.5
LRPPRC-205ENST00000447246 WDR78Q5VTH9 848 aa18.19■□□□□ 0.5
LRPPRC-205ENST00000447246 KLHDC4Q8TBB5 520 aa18.19■□□□□ 0.5
LRPPRC-205ENST00000447246 KHSRPQ92945 711 aaKnown RBP eCLIP18.19■□□□□ 0.53e-7■■■■□ 19.7
LRPPRC-205ENST00000447246 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
LRPPRC-205ENST00000447246 CXXC1Q9P0U4 656 aaPredicted RBP18.19■□□□□ 0.5
LRPPRC-205ENST00000447246 USP17L5A8MUK1 530 aa18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 CLTBP09497 229 aa18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 RAG1P15918 1043 aa18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 NPLOC4Q8TAT6 608 aa18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
LRPPRC-205ENST00000447246 TRANK1O15050 2925 aa18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 CYBAP13498 195 aa18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 FGFR2P21802 821 aa18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 ATP2B2Q01814 1243 aa18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 PUM3Q15397 648 aaKnown RBP18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
LRPPRC-205ENST00000447246 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
LRPPRC-205ENST00000447246 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
LRPPRC-205ENST00000447246 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.16■□□□□ 0.52e-16■□□□□ 10.6
LRPPRC-205ENST00000447246 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
LRPPRC-205ENST00000447246 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
LRPPRC-205ENST00000447246 GAKO14976 1311 aa18.16■□□□□ 0.5
LRPPRC-205ENST00000447246 CAP2P40123 477 aa18.15■□□□□ 0.5
LRPPRC-205ENST00000447246 AS3MTQ9HBK9 375 aa18.15■□□□□ 0.5
LRPPRC-205ENST00000447246 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
LRPPRC-205ENST00000447246 LRRC37A2A6NM11 1700 aa18.15■□□□□ 0.5
LRPPRC-205ENST00000447246 GBF1Q92538 1859 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 KIAA0355O15063 1070 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 TBC1D12O60347 775 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 BTDP43251 543 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 BACE1P56817 501 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 RALBP1Q15311 655 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 SHROOM1Q2M3G4 852 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 TSPYL2Q9H2G4 693 aaPredicted RBP18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
LRPPRC-205ENST00000447246 CNMDO75829 334 aa18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 SLC5A1P13866 664 aa18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 JAG1P78504 1218 aa18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 LRRC41Q15345 812 aa18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 SKIV2LQ15477 1246 aaKnown RBP18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
LRPPRC-205ENST00000447246 GPR37L1O60883 481 aa18.12■□□□□ 0.49
LRPPRC-205ENST00000447246 PTPREP23469 700 aa18.12■□□□□ 0.49
LRPPRC-205ENST00000447246 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
LRPPRC-205ENST00000447246 C1orf53Q5VUE5 145 aa18.12■□□□□ 0.49
LRPPRC-205ENST00000447246 NKX2-4Q9H2Z4 354 aa18.12■□□□□ 0.49
LRPPRC-205ENST00000447246 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 GLRX3O76003 335 aaKnown RBP18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 WDR18Q9BV38 432 aa18.11■□□□□ 0.49
LRPPRC-205ENST00000447246 SIPA1L1O43166 1804 aa18.1■□□□□ 0.49
LRPPRC-205ENST00000447246 SALL1Q9NSC2 1324 aa18.1■□□□□ 0.49
LRPPRC-205ENST00000447246 HOXC6P09630 235 aa18.1■□□□□ 0.49
LRPPRC-205ENST00000447246 NBPF7P0C2Y1 421 aaPredicted RBP18.1■□□□□ 0.49
LRPPRC-205ENST00000447246 GRB14Q14449 540 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms