RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 SCARF2Q96GP6 870 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 TMEM87BQ96K49 555 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 SRPK1Q96SB4 655 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 TNKS2Q9H2K2 1166 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 TJP2Q9UDY2 1190 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 USP21Q9UK80 565 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 MSRB2Q9Y3D2 182 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 ACTL7BQ9Y614 415 aa6.06□□□□□ -1.44
R3HDM1-211ENST00000445855 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 CHURC1-FNTBB4DL54 471 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 APBA3O96018 575 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 HCLS1P14317 486 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 RAG1P15918 1043 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 CCNFP41002 786 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 ASPAP45381 313 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 INSM1Q01101 510 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 RASA3Q14644 834 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 ARSHQ5FYA8 562 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 LARP1BQ659C4 914 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 CELF2-AS1Q8N7Q2 184 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 DEPDC7Q96QD5 511 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 CCDC113Q9H0I3 377 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 FBRSQ9HAH7 460 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 SNTG2Q9NY99 539 aa6.05□□□□□ -1.44
R3HDM1-211ENST00000445855 TLDC2A0PJX2 215 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 SART1O43290 800 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 RNGTTO60942 597 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 ACRP10323 421 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 UNC5AQ6ZN44 842 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 SMYD4Q8IYR2 804 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 FAM177A1Q8N128 213 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 ISL2Q96A47 359 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 PHAXQ9H814 394 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 PCOLCE2Q9UKZ9 415 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 TBX22Q9Y458 520 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 CADPSQ9ULU8 1353 aa6.04□□□□□ -1.44
R3HDM1-211ENST00000445855 UPK3BL1B0FP48 263 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 UPK3BL2E5RIL1 263 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 ALX3O95076 343 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 CST3P01034 146 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 GLB1P16278 677 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 COL8A1P27658 744 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 PREPP48147 710 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 RASGRF1Q13972 1273 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 SLBPQ14493 270 aaKnown RBP eCLIP6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 NKG7Q16617 165 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 SLC9A7Q96T83 725 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 YIPF2Q9BWQ6 316 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 ACSS3Q9H6R3 686 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 ST7Q9NRC1 585 aa6.03□□□□□ -1.44
R3HDM1-211ENST00000445855 RGS13O14921 159 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 LRIG2O94898 1065 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 USP11P51784 963 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 ADGRE1Q14246 886 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 NCAPHQ15003 741 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 ZYXQ15942 572 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 UBE3DQ7Z6J8 389 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 PHACTR4Q8IZ21 702 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 CYB5D2Q8WUJ1 264 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 FAM46AQ96IP4 442 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 DHRS1Q96LJ7 313 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 CCDC74BQ96LY2 380 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 FOXQ1Q9C009 403 aa6.02□□□□□ -1.45
R3HDM1-211ENST00000445855 LTBP3Q9NS15 1303 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 FAM221BA6H8Z2 402 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 CCDC85CA6NKD9 419 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 PDPK1O15530 556 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 DDAH1O94760 285 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 GJB6O95452 261 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 NOS3P29474 1203 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 IFRD2Q12894 506 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 MBTPS1Q14703 1052 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 PRAMEF13Q5VWM6 474 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 VHLLQ6RSH7 139 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 C6orf15Q6UXA7 325 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 MFSD2AQ8NA29 543 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 MICAL1Q8TDZ2 1067 aa6.01□□□□□ -1.45
R3HDM1-211ENST00000445855 B2RBV5 119 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 RAB6AP20340 208 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 POLR2BP30876 1174 aaKnown RBP6□□□□□ -1.45
R3HDM1-211ENST00000445855 IREB2P48200 963 aaKnown RBP6□□□□□ -1.45
R3HDM1-211ENST00000445855 SDE2Q6IQ49 451 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 CDPF1Q6NVV7 123 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 ARMCX6Q7L4S7 300 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 JAZF1Q86VZ6 243 aa6□□□□□ -1.45
R3HDM1-211ENST00000445855 DZIP1LQ8IYY4 767 aaKnown RBP6□□□□□ -1.45
R3HDM1-211ENST00000445855 ST13P5Q8NFI4 369 aaPredicted RBP6□□□□□ -1.45
R3HDM1-211ENST00000445855 EZH1Q92800 747 aaPredicted RBP6□□□□□ -1.45
R3HDM1-211ENST00000445855 ZNF669Q96BR6 464 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms