RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 POLR3DP05423 398 aaPredicted RBP21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 RBM43Q6ZSC3 357 aaKnown RBP21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 TGFBRAP1Q8WUH2 860 aa21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 FTOQ9C0B1 505 aaKnown RBP eCLIP21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 ZNF287Q9HBT7 754 aa21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
SEMA3D-202ENST00000444867 TSPY2A6NKD2 308 aa21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 TROAPQ12815 778 aa21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 GNL2Q13823 731 aaKnown RBP21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 STK38Q15208 465 aa21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 SAFBQ15424 915 aaKnown RBP eCLIP21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 TNMDQ9H2S6 317 aa21.86■■□□□ 1.09
SEMA3D-202ENST00000444867 A0A1W2PQ27 194 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 A0A1W2PQ64 194 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 A0A1W2PQD8 194 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 H0YIN7 160 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 RIMBP2O15034 1052 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 CCDC192P0DO97 292 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 ME1P48163 572 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 GTF2IP78347 998 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 AKAP17AQ02040 695 aaKnown RBP21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 ADALQ6DHV7 355 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 CCDC73Q6ZRK6 1079 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 CCAR1Q8IX12 1150 aaKnown RBP21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 TEX11Q8IYF3 940 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 ANKS1AQ92625 1134 aa21.85■■□□□ 1.09
SEMA3D-202ENST00000444867 MMP1P03956 469 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 EVX2Q03828 476 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 TCP11L1Q9NUJ3 509 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 SPTLC2O15270 562 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 CTAGE5O15320 804 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 PRPF3O43395 683 aaKnown RBP21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 NR1I2O75469 434 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 XBP1P17861 261 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 RHBDL3P58872 404 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 SF3A1Q15459 793 aaKnown RBP21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 FAM47AQ5JRC9 791 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 DGKHQ86XP1 1220 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 CTCFLQ8NI51 663 aaPredicted RBP21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 MKNK2Q9HBH9 465 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 CLIC4Q9Y696 253 aa21.84■■□□□ 1.09
SEMA3D-202ENST00000444867 FUT2Q10981 343 aa21.83■■□□□ 1.08
SEMA3D-202ENST00000444867 MAPKAPK5Q8IW41 473 aa21.83■■□□□ 1.08
SEMA3D-202ENST00000444867 FOXP1Q9H334 677 aaPredicted RBP21.83■■□□□ 1.08
SEMA3D-202ENST00000444867 PCDHA7Q9UN72 937 aa21.83■■□□□ 1.08
SEMA3D-202ENST00000444867 GUCY1A2P33402 732 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 TFAP4Q01664 338 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 FAM160A1Q05DH4 1040 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 RNF214Q8ND24 703 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 PDLIM2Q96JY6 352 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 DAGLAQ9Y4D2 1042 aa21.82■■□□□ 1.08
SEMA3D-202ENST00000444867 SLC39A14Q15043 492 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 TMTC3Q6ZXV5 915 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 ZNF444Q8N0Y2 327 aaPredicted RBP21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 JMYQ8N9B5 988 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 MRPS27Q92552 414 aaKnown RBP21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 CNKSR1Q969H4 720 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 FLT1P17948 1338 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 SLX4Q8IY92 1834 aa21.81■■□□□ 1.08
SEMA3D-202ENST00000444867 G3V3G9 751 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 DCAF8Q5TAQ9 597 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 C16orf86Q6ZW13 317 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 PODNQ7Z5L7 613 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 NOSTRINQ8IVI9 506 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 FSIP1Q8NA03 581 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 ENGASEQ8NFI3 743 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 TRIM44Q96DX7 344 aaPredicted RBP21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 KAT14Q9H8E8 782 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 PPP6R2O75170 966 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 KIF5BP33176 963 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 DIS3L2Q8IYB7 885 aaKnown RBP21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 DYNLL2Q96FJ2 89 aa21.8■■□□□ 1.08
SEMA3D-202ENST00000444867 NMT2O60551 498 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 TSPY3P0CV98 308 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 TSPY8P0CW00 308 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 PLCD1P51178 756 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 FKBP1AP62942 108 aaKnown RBP21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 SNW1Q13573 536 aaKnown RBP21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 CAMK4Q16566 473 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 OLFM4Q6UX06 510 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 CMTR1Q8N1G2 835 aaKnown RBP21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 CCDC82Q8N4S0 544 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 GOLPH3LQ9H4A5 285 aa21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 SAP30BPQ9UHR5 308 aaKnown RBP21.79■■□□□ 1.08
SEMA3D-202ENST00000444867 CNTNAP5Q8WYK1 1306 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 UBE2Q2LH0YL09 131 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 PLEKHA8P1O95397 391 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 RASA1P20936 1047 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 TYRO3Q06418 890 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 HHIPL2Q6UWX4 724 aa21.78■■□□□ 1.08
SEMA3D-202ENST00000444867 FAM43AQ8N2R8 423 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms