RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MORN1Q5T089 497 aa17.8■□□□□ 0.44
HMGN1-208ENST00000443046 PI4KBQ9UBF8 816 aa17.8■□□□□ 0.44
HMGN1-208ENST00000443046 C19orf81C9J6K1 198 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 ASNSP08243 561 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 MAPK4P31152 587 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-208ENST00000443046 LRRC26Q2I0M4 334 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 FAM109BQ6ICB4 259 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-208ENST00000443046 TRMT2AQ8IZ69 625 aaKnown RBP17.79■□□□□ 0.44
HMGN1-208ENST00000443046 MEIS3Q99687 375 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
HMGN1-208ENST00000443046 DNAJC18Q9H819 358 aa17.79■□□□□ 0.44
HMGN1-208ENST00000443046 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
HMGN1-208ENST00000443046 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
HMGN1-208ENST00000443046 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
HMGN1-208ENST00000443046 SH3RF3Q8TEJ3 882 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-208ENST00000443046 COL25A1Q9BXS0 654 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-208ENST00000443046 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 FOCADQ5VW36 1801 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 ZKSCAN1P17029 563 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-208ENST00000443046 CCND3P30281 292 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-208ENST00000443046 ERVK-9P63128 1117 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 ERVK-24P63145 666 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 GPR142Q7Z601 462 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
HMGN1-208ENST00000443046 PORCNQ9H237 461 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 GINM1Q9NU53 330 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 TMOD4Q9NZQ9 345 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 MUC3AQ02505 3323 aa17.77■□□□□ 0.44
HMGN1-208ENST00000443046 USP17L10C9JJH3 530 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 SRGAP3O43295 1099 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 RGS2P41220 211 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 MCAMP43121 646 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 PPP4CP60510 307 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 CCL14Q16627 93 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-208ENST00000443046 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-208ENST00000443046 GTF3C2Q8WUA4 911 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-208ENST00000443046 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 GUCD1Q96NT3 240 aa17.76■□□□□ 0.43
HMGN1-208ENST00000443046 CT47B1P0C2W7 299 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-208ENST00000443046 MDM2Q00987 491 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-208ENST00000443046 PDE3AQ14432 1141 aa17.75■□□□□ 0.43
HMGN1-208ENST00000443046 PLEKHH3Q7Z736 793 aa17.75■□□□□ 0.43
HMGN1-208ENST00000443046 APBA2Q99767 749 aa17.75■□□□□ 0.43
HMGN1-208ENST00000443046 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
HMGN1-208ENST00000443046 MAST2Q6P0Q8 1798 aa17.74■□□□□ 0.43
HMGN1-208ENST00000443046 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.74■□□□□ 0.43
HMGN1-208ENST00000443046 FLT1P17948 1338 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 CNMDO75829 334 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 IGHA2P01877 340 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 AATFQ9NY61 560 aaKnown RBP eCLIP17.73■□□□□ 0.43
HMGN1-208ENST00000443046 LRP2BPQ9P2M1 347 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
HMGN1-208ENST00000443046 GDF11O95390 407 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 BAG3O95817 575 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 GNAI3P08754 354 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 UQCRFS1P1P0C7P4 283 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 PLCG2P16885 1265 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 MAP2K5Q13163 448 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 MAPKAPK5Q8IW41 473 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 TGFBRAP1Q8WUH2 860 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 C12orf42Q96LP6 360 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 FLRT1Q9NZU1 646 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 RABGAP1Q9Y3P9 1069 aa17.72■□□□□ 0.43
HMGN1-208ENST00000443046 IGSF3O75054 1194 aa17.71■□□□□ 0.43
HMGN1-208ENST00000443046 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-208ENST00000443046 USP17L2Q6R6M4 530 aa17.71■□□□□ 0.43
HMGN1-208ENST00000443046 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
HMGN1-208ENST00000443046 EDC3Q96F86 508 aaKnown RBP17.71■□□□□ 0.43
HMGN1-208ENST00000443046 NOL10Q9BSC4 688 aaKnown RBP17.71■□□□□ 0.43
HMGN1-208ENST00000443046 PALD1Q9ULE6 856 aa17.71■□□□□ 0.43
HMGN1-208ENST00000443046 MYO5AQ9Y4I1 1855 aaKnown RBP17.71■□□□□ 0.43
HMGN1-208ENST00000443046 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
HMGN1-208ENST00000443046 HOXC6P09630 235 aa17.7■□□□□ 0.42
HMGN1-208ENST00000443046 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
HMGN1-208ENST00000443046 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
HMGN1-208ENST00000443046 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
HMGN1-208ENST00000443046 SENP6Q9GZR1 1112 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-208ENST00000443046 RLFQ13129 1914 aa17.69■□□□□ 0.42
HMGN1-208ENST00000443046 SLC15A5A6NIM6 579 aa17.69■□□□□ 0.42
HMGN1-208ENST00000443046 PTPREP23469 700 aa17.69■□□□□ 0.42
HMGN1-208ENST00000443046 TATDN1Q6P1N9 297 aa17.69■□□□□ 0.42
HMGN1-208ENST00000443046 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
HMGN1-208ENST00000443046 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-208ENST00000443046 LPAR1Q92633 364 aa17.69■□□□□ 0.42
HMGN1-208ENST00000443046 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
HMGN1-208ENST00000443046 MSCO60682 206 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms