RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
LINC00299-202ENST00000442956 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.31
LINC00299-202ENST00000442956 CDK8P49336 464 aa17.02■□□□□ 0.31
LINC00299-202ENST00000442956 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.31
LINC00299-202ENST00000442956 DALRD3Q5D0E6 543 aaKnown RBP17.02■□□□□ 0.31
LINC00299-202ENST00000442956 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.31
LINC00299-202ENST00000442956 ALG1Q9BT22 464 aa17.02■□□□□ 0.31
LINC00299-202ENST00000442956 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.31
LINC00299-202ENST00000442956 GJB4Q9NTQ9 266 aa17.02■□□□□ 0.31
LINC00299-202ENST00000442956 PSDA5PKW4 1024 aaPredicted RBP17.01■□□□□ 0.31
LINC00299-202ENST00000442956 MBD3O95983 291 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 RASA1P20936 1047 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
LINC00299-202ENST00000442956 TROAPQ12815 778 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 CSPP1Q1MSJ5 1256 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 FMNL1O95466 1100 aaPredicted RBP17.01■□□□□ 0.31
LINC00299-202ENST00000442956 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
LINC00299-202ENST00000442956 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
LINC00299-202ENST00000442956 STK36Q9NRP7 1315 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 DDAH1O94760 285 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 CALM1P0DP23 149 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 CALM2P0DP24 149 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 CALM3P0DP25 149 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
LINC00299-202ENST00000442956 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
LINC00299-202ENST00000442956 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
LINC00299-202ENST00000442956 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
LINC00299-202ENST00000442956 RAD17O75943 681 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 NFIAQ12857 509 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 CRACR2BQ8N4Y2 399 aaPredicted RBP16.99■□□□□ 0.31
LINC00299-202ENST00000442956 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
LINC00299-202ENST00000442956 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 UBE2Q2LH0YL09 131 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
LINC00299-202ENST00000442956 CCDC178Q5BJE1 867 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
LINC00299-202ENST00000442956 KAT14Q9H8E8 782 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 CACNB3P54284 484 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 UBE2HP62256 183 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
LINC00299-202ENST00000442956 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 WASF1Q92558 559 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 RBM28Q9NW13 759 aaKnown RBP16.98■□□□□ 0.31
LINC00299-202ENST00000442956 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 COL4A5P29400 1685 aa16.98■□□□□ 0.31
LINC00299-202ENST00000442956 PSMD14O00487 310 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 GUCY1A2P33402 732 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 GABPAQ06546 454 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
LINC00299-202ENST00000442956 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
LINC00299-202ENST00000442956 ZNRF3Q9ULT6 936 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 MYO3BQ8WXR4 1341 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
LINC00299-202ENST00000442956 PTGER2P43116 358 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 SPATA32Q96LK8 384 aa16.97■□□□□ 0.31
LINC00299-202ENST00000442956 TCHHQ07283 1943 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 DEXIO95424 95 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 TRIM29Q14134 588 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 CFAP100Q494V2 611 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 KRT40Q6A162 431 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 ZFPM1Q8IX07 1006 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 PNMA1Q8ND90 353 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
LINC00299-202ENST00000442956 TAOK3Q9H2K8 898 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 SERPINB13Q9UIV8 391 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 STX8Q9UNK0 236 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 ZNF646O15015 1829 aaPredicted RBP16.96■□□□□ 0.31
LINC00299-202ENST00000442956 ELP1O95163 1332 aa16.96■□□□□ 0.31
LINC00299-202ENST00000442956 HLA-DOAP06340 250 aa16.96■□□□□ 0.3
LINC00299-202ENST00000442956 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.3
LINC00299-202ENST00000442956 FUT2Q10981 343 aa16.96■□□□□ 0.3
LINC00299-202ENST00000442956 IDI2Q9BXS1 227 aa16.96■□□□□ 0.3
LINC00299-202ENST00000442956 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.3
LINC00299-202ENST00000442956 TCP10Q12799 353 aa16.95■□□□□ 0.3
LINC00299-202ENST00000442956 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
LINC00299-202ENST00000442956 GMLQ99445 158 aa16.95■□□□□ 0.3
LINC00299-202ENST00000442956 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
LINC00299-202ENST00000442956 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms