RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 PROCA1Q8NCQ7 364 aaPredicted RBP26.71■■□□□ 1.87
HDLBP-220ENST00000442730 WDR18Q9BV38 432 aa26.71■■□□□ 1.87
HDLBP-220ENST00000442730 ARHGAP39Q9C0H5 1083 aa26.71■■□□□ 1.87
HDLBP-220ENST00000442730 MCM9Q9NXL9 1143 aa26.71■■□□□ 1.87
HDLBP-220ENST00000442730 PTPN22Q9Y2R2 807 aa26.71■■□□□ 1.87
HDLBP-220ENST00000442730 HMGCS2P54868 508 aa26.7■■□□□ 1.86
HDLBP-220ENST00000442730 PI4K2BQ8TCG2 481 aa26.7■■□□□ 1.86
HDLBP-220ENST00000442730 SALL3Q9BXA9 1300 aa26.69■■□□□ 1.86
HDLBP-220ENST00000442730 PRKAB2O43741 272 aa26.69■■□□□ 1.86
HDLBP-220ENST00000442730 POLR3DP05423 398 aaPredicted RBP26.69■■□□□ 1.86
HDLBP-220ENST00000442730 EVX2Q03828 476 aa26.69■■□□□ 1.86
HDLBP-220ENST00000442730 GCC1Q96CN9 775 aa26.69■■□□□ 1.86
HDLBP-220ENST00000442730 GH2P01242 217 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 BCRP11274 1271 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 MX1P20591 662 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 SHMT1P34896 483 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 GABPAQ06546 454 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 MTMR2Q13614 643 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 ARHGEF6Q15052 776 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 SH3D19Q5HYK7 790 aa26.68■■□□□ 1.86
HDLBP-220ENST00000442730 PUS7LQ9H0K6 701 aaKnown RBP26.68■■□□□ 1.86
HDLBP-220ENST00000442730 ERC2O15083 957 aa26.67■■□□□ 1.86
HDLBP-220ENST00000442730 CYP2D6P10635 497 aa26.67■■□□□ 1.86
HDLBP-220ENST00000442730 BACE1P56817 501 aa26.67■■□□□ 1.86
HDLBP-220ENST00000442730 KIF22Q14807 665 aa26.67■■□□□ 1.86
HDLBP-220ENST00000442730 ATP8A2Q9NTI2 1148 aa26.67■■□□□ 1.86
HDLBP-220ENST00000442730 GLRX3O76003 335 aaKnown RBP26.66■■□□□ 1.86
HDLBP-220ENST00000442730 CTGFP29279 349 aa26.66■■□□□ 1.86
HDLBP-220ENST00000442730 SOX10P56693 466 aa26.66■■□□□ 1.86
HDLBP-220ENST00000442730 ANKRD45Q5TZF3 282 aa26.66■■□□□ 1.86
HDLBP-220ENST00000442730 EXOC6Q8TAG9 804 aa26.66■■□□□ 1.86
HDLBP-220ENST00000442730 RGS19P49795 217 aa26.65■■□□□ 1.86
HDLBP-220ENST00000442730 CERKLQ49MI3 558 aaPredicted RBP26.65■■□□□ 1.86
HDLBP-220ENST00000442730 SMCR8Q8TEV9 937 aaPredicted RBP26.65■■□□□ 1.86
HDLBP-220ENST00000442730 RNF113AO15541 343 aaKnown RBP26.64■■□□□ 1.86
HDLBP-220ENST00000442730 ABCB5Q2M3G0 1257 aa26.64■■□□□ 1.86
HDLBP-220ENST00000442730 TRIM47Q96LD4 638 aa26.64■■□□□ 1.86
HDLBP-220ENST00000442730 PNMA3Q9UL41 463 aa26.64■■□□□ 1.86
HDLBP-220ENST00000442730 SLC4A4Q9Y6R1 1079 aa26.64■■□□□ 1.86
HDLBP-220ENST00000442730 GNRH1P01148 92 aa26.63■■□□□ 1.85
HDLBP-220ENST00000442730 APPBP2Q92624 585 aa26.63■■□□□ 1.85
HDLBP-220ENST00000442730 ZBTB47Q9UFB7 747 aaPredicted RBP26.63■■□□□ 1.85
HDLBP-220ENST00000442730 SUPT16HQ9Y5B9 1047 aaKnown RBP26.63■■□□□ 1.85
HDLBP-220ENST00000442730 PTCH2Q9Y6C5 1203 aa26.63■■□□□ 1.85
HDLBP-220ENST00000442730 CENPFP49454 3210 aa26.63■■□□□ 1.85
HDLBP-220ENST00000442730 C19orf81C9J6K1 198 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 USP17L10C9JJH3 530 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 ECM2O94769 699 aaPredicted RBP26.62■■□□□ 1.85
HDLBP-220ENST00000442730 ZFYP08048 801 aaPredicted RBP26.62■■□□□ 1.85
HDLBP-220ENST00000442730 PABPC4Q13310 644 aaKnown RBP eCLIP26.62■■□□□ 1.858e-8■■■■□ 24.6
HDLBP-220ENST00000442730 SLC44A5Q8NCS7 719 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 OSBP2Q969R2 916 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 STRBPQ96SI9 672 aaKnown RBP26.62■■□□□ 1.85
HDLBP-220ENST00000442730 TMOD4Q9NZQ9 345 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 TAOK2Q9UL54 1235 aa26.62■■□□□ 1.85
HDLBP-220ENST00000442730 BAZ2AQ9UIF9 1905 aaKnown RBP26.62■■□□□ 1.85
HDLBP-220ENST00000442730 PSMC4P43686 418 aa26.61■■□□□ 1.85
HDLBP-220ENST00000442730 RAB3GAP1Q15042 981 aa26.61■■□□□ 1.85
HDLBP-220ENST00000442730 ARMC5Q96C12 935 aa26.61■■□□□ 1.85
HDLBP-220ENST00000442730 CYP2D7A0A087X1C5 515 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 GUCY1A2P33402 732 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 C12orf60Q5U649 245 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 SMC5Q8IY18 1101 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 DYNLL2Q96FJ2 89 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 DDRGK1Q96HY6 314 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 ASCC2Q9H1I8 757 aaPredicted RBP26.6■■□□□ 1.85
HDLBP-220ENST00000442730 RWDD1Q9H446 243 aaPredicted RBP26.6■■□□□ 1.85
HDLBP-220ENST00000442730 STAP2Q9UGK3 403 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 SWAP70Q9UH65 585 aa26.6■■□□□ 1.85
HDLBP-220ENST00000442730 USP17L12C9JPN9 530 aa26.59■■□□□ 1.85
HDLBP-220ENST00000442730 USP17L21D6R901 530 aa26.59■■□□□ 1.85
HDLBP-220ENST00000442730 SMIM22K7EJ46 135 aa26.59■■□□□ 1.85
HDLBP-220ENST00000442730 CABP5Q9NP86 173 aa26.59■■□□□ 1.85
HDLBP-220ENST00000442730 EMILIN3Q9NT22 766 aa26.59■■□□□ 1.85
HDLBP-220ENST00000442730 M0R2C6 588 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 FMNL1O95466 1100 aaPredicted RBP26.58■■□□□ 1.85
HDLBP-220ENST00000442730 OSBPP22059 807 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 HOXA7P31268 230 aaPredicted RBP26.58■■□□□ 1.85
HDLBP-220ENST00000442730 PRMT2P55345 433 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 FCGRTP55899 365 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 LRRFIP1Q32MZ4 808 aaKnown RBP26.58■■□□□ 1.85
HDLBP-220ENST00000442730 AMOTL1Q8IY63 956 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 ANKRD13CQ8N6S4 541 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 FSD1Q9BTV5 496 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 SRRDQ9UH36 339 aa26.58■■□□□ 1.85
HDLBP-220ENST00000442730 GSG1L2A8MUP6 293 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 GPAA1O43292 621 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 IGHDP01880 384 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 PDE1AP54750 535 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 SEPT2Q15019 361 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 FAM110CQ1W6H9 321 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 CTR9Q6PD62 1173 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 USP17L2Q6R6M4 530 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 ACER1Q8TDN7 264 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 C12orf42Q96LP6 360 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 FEZ1Q99689 392 aa26.57■■□□□ 1.84
HDLBP-220ENST00000442730 ARPP21Q9UBL0 812 aaPredicted RBP26.57■■□□□ 1.84
HDLBP-220ENST00000442730 GCLCP48506 637 aaPredicted RBP26.56■■□□□ 1.84
HDLBP-220ENST00000442730 IRX3P78415 501 aaPredicted RBP26.56■■□□□ 1.84
HDLBP-220ENST00000442730 SLC9C1Q4G0N8 1177 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms