RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 MIER1Q8N108 512 aa12.41□□□□□ -0.42
HDLBP-219ENST00000442714 GPRC5AQ8NFJ5 357 aa12.41□□□□□ -0.42
HDLBP-219ENST00000442714 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
HDLBP-219ENST00000442714 TMOD4Q9NZQ9 345 aa12.41□□□□□ -0.42
HDLBP-219ENST00000442714 SAP30BPQ9UHR5 308 aaKnown RBP12.41□□□□□ -0.42
HDLBP-219ENST00000442714 MYH2Q9UKX2 1941 aa12.41□□□□□ -0.42
HDLBP-219ENST00000442714 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
HDLBP-219ENST00000442714 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 GDF11O95390 407 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 XRCC5P13010 732 aaKnown RBP12.4□□□□□ -0.42
HDLBP-219ENST00000442714 HERVK_113P62684 666 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.421e-6■□□□□ 8.9
HDLBP-219ENST00000442714 TRIM32Q13049 653 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-219ENST00000442714 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
HDLBP-219ENST00000442714 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-219ENST00000442714 USP6NLQ92738 828 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
HDLBP-219ENST00000442714 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
HDLBP-219ENST00000442714 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 EVI5O60447 810 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
HDLBP-219ENST00000442714 GH2P01242 217 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 HMGCRP04035 888 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-219ENST00000442714 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
HDLBP-219ENST00000442714 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.432e-10■■□□□ 13.3
HDLBP-219ENST00000442714 HMX1Q9NP08 348 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-219ENST00000442714 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 CYP2B6P20813 491 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 ANKLE1Q8NAG6 615 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 EHD4Q9H223 541 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 EXOC6BQ9Y2D4 811 aa12.38□□□□□ -0.43
HDLBP-219ENST00000442714 MAPK4P31152 587 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 USP5P45974 858 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 PLCD1P51178 756 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 MAP3K12Q12852 859 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 CERKLQ49MI3 558 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-219ENST00000442714 MORN1Q5T089 497 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 AACSQ86V21 672 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 DIS3LQ8TF46 1054 aaKnown RBP12.37□□□□□ -0.43
HDLBP-219ENST00000442714 TRIB2Q92519 343 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 C12orf42Q96LP6 360 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
HDLBP-219ENST00000442714 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 OGDHLQ9ULD0 1010 aa12.37□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 CNMDO75829 334 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 ERVK-9P63128 1117 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 ERVK-24P63145 666 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 LHX8Q68G74 356 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 TRMT44Q8IYL2 757 aaKnown RBP12.36□□□□□ -0.43
HDLBP-219ENST00000442714 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 ACER1Q8TDN7 264 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 GTF3C2Q8WUA4 911 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-219ENST00000442714 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 PORCNQ9H237 461 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 RABGAP1Q9Y3P9 1069 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
HDLBP-219ENST00000442714 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 SHMT1P34896 483 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 GABPAQ06546 454 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-219ENST00000442714 ABCB5Q2M3G0 1257 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 GPR142Q7Z601 462 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 PLEKHH3Q7Z736 793 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-219ENST00000442714 KIAA1683Q9H0B3 1180 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
HDLBP-219ENST00000442714 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms