RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
PTPRN-206ENST00000442029 PDE6AP16499 860 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 MTMR2Q13614 643 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 METTL16Q86W50 562 aaKnown RBP17.51■□□□□ 0.39
PTPRN-206ENST00000442029 ANKRD13CQ8N6S4 541 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 WDR18Q9BV38 432 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
PTPRN-206ENST00000442029 LRRCC1Q9C099 1032 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 BIN2Q9UBW5 565 aaPredicted RBP17.51■□□□□ 0.39
PTPRN-206ENST00000442029 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
PTPRN-206ENST00000442029 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
PTPRN-206ENST00000442029 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
PTPRN-206ENST00000442029 EN2P19622 333 aaPredicted RBP17.5■□□□□ 0.39
PTPRN-206ENST00000442029 GRK4P32298 578 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
PTPRN-206ENST00000442029 BACE1P56817 501 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 PRKCZQ05513 592 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 PAG1Q9NWQ8 432 aa17.5■□□□□ 0.39
PTPRN-206ENST00000442029 C19orf81C9J6K1 198 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 UBXN2AP68543 259 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 IRX3P78415 501 aaPredicted RBP17.49■□□□□ 0.39
PTPRN-206ENST00000442029 FAM110CQ1W6H9 321 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 PRPF38BQ5VTL8 546 aaKnown RBP17.49■□□□□ 0.39
PTPRN-206ENST00000442029 COA7Q96BR5 231 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
PTPRN-206ENST00000442029 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPRN-206ENST00000442029 EHD4Q9H223 541 aa17.49■□□□□ 0.39
PTPRN-206ENST00000442029 ATP5JP18859 108 aa17.48■□□□□ 0.39
PTPRN-206ENST00000442029 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
PTPRN-206ENST00000442029 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
PTPRN-206ENST00000442029 GH2P01242 217 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 CERKLQ49MI3 558 aaPredicted RBP17.47■□□□□ 0.39
PTPRN-206ENST00000442029 SLAIN1Q8ND83 568 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 EDC3Q96F86 508 aaKnown RBP17.47■□□□□ 0.39
PTPRN-206ENST00000442029 FEZ1Q99689 392 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 MCM9Q9NXL9 1143 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
PTPRN-206ENST00000442029 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
PTPRN-206ENST00000442029 FLT3LGP49771 235 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 JAG1P78504 1218 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 ABCB5Q2M3G0 1257 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 SHROOM1Q2M3G4 852 aaPredicted RBP17.46■□□□□ 0.39
PTPRN-206ENST00000442029 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 HAUS7Q99871 368 aa17.46■□□□□ 0.39
PTPRN-206ENST00000442029 TCRBV5S4A2TA0A5A2 114 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 ADCY3O60266 1144 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 HOXA7P31268 230 aaPredicted RBP17.45■□□□□ 0.38
PTPRN-206ENST00000442029 ADD2P35612 726 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 MTFR1Q15390 333 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 SDR42E1Q8WUS8 393 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
PTPRN-206ENST00000442029 BRCA2P51587 3418 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 PLCD1P51178 756 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 USP14P54578 494 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
PTPRN-206ENST00000442029 AMOTL1Q8IY63 956 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 DDRGK1Q96HY6 314 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 PLXNB2O15031 1838 aa17.44■□□□□ 0.38
PTPRN-206ENST00000442029 MPHOSPH10O00566 681 aaKnown RBP17.43■□□□□ 0.38
PTPRN-206ENST00000442029 MBD4O95243 580 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 CCL5P13501 91 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 IRF5Q13568 498 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 CCAR1Q8IX12 1150 aaKnown RBP17.43■□□□□ 0.38
PTPRN-206ENST00000442029 PXYLP1Q8TE99 480 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 GTF3C2Q8WUA4 911 aaPredicted RBP17.43■□□□□ 0.38
PTPRN-206ENST00000442029 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 DCP1AQ9NPI6 582 aaPredicted RBP17.43■□□□□ 0.38
PTPRN-206ENST00000442029 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
PTPRN-206ENST00000442029 ELNP15502 786 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 SHMT1P34896 483 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 HERVK_113P62684 666 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 P2RX7Q99572 595 aaKnown RBP17.42■□□□□ 0.38
PTPRN-206ENST00000442029 EMILIN3Q9NT22 766 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
PTPRN-206ENST00000442029 GPRC5AQ8NFJ5 357 aa17.41■□□□□ 0.38
PTPRN-206ENST00000442029 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
PTPRN-206ENST00000442029 MORF4L1Q9UBU8 362 aa17.41■□□□□ 0.38
PTPRN-206ENST00000442029 SWAP70Q9UH65 585 aa17.41■□□□□ 0.38
PTPRN-206ENST00000442029 INHAP05111 366 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 GJB1P08034 283 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 GABPAQ06546 454 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 PAGR1Q9BTK6 254 aa17.4■□□□□ 0.38
PTPRN-206ENST00000442029 MKI67P46013 3256 aaKnown RBP17.39■□□□□ 0.37
PTPRN-206ENST00000442029 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms