RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 CABP5Q9NP86 173 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 TMEM51Q9NW97 253 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 PRR29P0C7W0 189 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 H2AFXP16104 143 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 ZNF18P17022 549 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 XBP1P17861 261 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 CCDC152Q4G0S7 254 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 SPECC1LQ69YQ0 1117 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 TMEM139Q8IV31 216 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 NUTM2AQ8IVF1 878 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 CCDC34Q96HJ3 373 aa18.87■□□□□ 0.61
SEMA3B-207ENST00000441915 EXOC5O00471 708 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 AKAP17AQ02040 695 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 TBX2Q13207 712 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 PPP2R2CQ9Y2T4 447 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 GOLGA6L9A6NEM1 432 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 STX10O60499 249 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 IGSF3O75054 1194 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 LRRN4CLQ8ND94 238 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 OXER1Q8TDS5 423 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 ESR2Q92731 530 aa18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-207ENST00000441915 URI1O94763 535 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 ZNF827Q17R98 1081 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 ARHGAP29Q52LW3 1261 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 UBXN4Q92575 508 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 FAM53CQ9NYF3 392 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 SLIT2O94813 1529 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 CYP7A1P22680 504 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 CSRNP2Q9H175 543 aa18.85■□□□□ 0.61
SEMA3B-207ENST00000441915 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 TNKSO95271 1327 aa18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 TRMT44Q8IYL2 757 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 GRAMD1CQ8IYS0 662 aa18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 VWA3AA6NCI4 1184 aa18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 BMS1Q14692 1282 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-207ENST00000441915 BCORQ6W2J9 1755 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 PARP10Q53GL7 1025 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 ZNF771Q7L3S4 317 aaPredicted RBP18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 TC2NQ8N9U0 490 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 SPATA20Q8TB22 786 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 SDR42E1Q8WUS8 393 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 ZNF446Q9NWS9 450 aa18.83■□□□□ 0.61
SEMA3B-207ENST00000441915 TRIM75PA6NK02 468 aa18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 ERCC5P28715 1186 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 ADKP55263 362 aaKnown RBP18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 CHRNDQ07001 517 aa18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 USP49Q70CQ1 688 aa18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 FAM177A1Q8N128 213 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 ARGLU1Q9NWB6 273 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 ABCF2Q9UG63 623 aa18.83■□□□□ 0.6
SEMA3B-207ENST00000441915 PLCD1P51178 756 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 SEC23AQ15436 765 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 SAMSN1Q9NSI8 373 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 PARP3Q9Y6F1 533 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 CLCN6P51797 869 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 AATFQ9NY61 560 aaKnown RBP eCLIP18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
SEMA3B-207ENST00000441915 MAGEB6P1A0A0J9YX57 407 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 FANCGO15287 622 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 VPS54Q9P1Q0 977 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 IQSEC3Q9UPP2 1182 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 EFCAB8A8MWE9 144 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 KRT2P35908 639 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 CT47A1Q5JQC4 288 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 ADGRA1Q86SQ6 560 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 DHX58Q96C10 678 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 CCDC87Q9NVE4 849 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 MYH6P13533 1939 aa18.81■□□□□ 0.6
SEMA3B-207ENST00000441915 CASQ1P31415 396 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 GNG11P61952 73 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 NR1I3Q14994 352 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 MED15Q96RN5 788 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 CARD6Q9BX69 1037 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 TPM1P09493 284 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 SLFN14P0C7P3 912 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 TADA3O75528 432 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 BMP15O95972 392 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 TERF2Q15554 542 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 CATIPQ7Z7H3 387 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 ENAHQ8N8S7 591 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 PHF20Q9BVI0 1012 aa18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 GNL3LQ9NVN8 582 aaKnown RBP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
SEMA3B-207ENST00000441915 A0A1B0GTH6 734 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 PKN1Q16512 942 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 TOGARAM2Q6ZUX3 1019 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms