RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 RAB30Q15771 203 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 CAVIN4Q5BKX8 364 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 CENPQQ7L2Z9 268 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-210ENST00000441703 GPRC5AQ8NFJ5 357 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 FAM84BQ96KN1 310 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-210ENST00000441703 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 MYH16Q9H6N6 1097 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 C11orf16Q9NQ32 467 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-210ENST00000441703 SUGT1Q9Y2Z0 365 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 PHIPQ8WWQ0 1821 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 DOCK1Q14185 1865 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 MYO9BQ13459 2157 aa7.93□□□□□ -1.14
HDAC6-210ENST00000441703 BDP1A6H8Y1 2624 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 RLFQ13129 1914 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 FSD2A1L4K1 749 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 PHF20L1A8MW92 1017 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 ERC2O15083 957 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 GLRX3O76003 335 aaKnown RBP7.92□□□□□ -1.14
HDAC6-210ENST00000441703 PBX2P40425 430 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 HMGCS2P54868 508 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 ATP2B2Q01814 1243 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 TLE2Q04725 743 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 CALD1Q05682 793 aaKnown RBP7.92□□□□□ -1.14
HDAC6-210ENST00000441703 NFIAQ12857 509 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 CCDC57Q2TAC2 916 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 GPR142Q7Z601 462 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 PLEKHH3Q7Z736 793 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-210ENST00000441703 C8orf58Q8NAV2 365 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 HERVK_113Q902F9 699 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 KCNH6Q9H252 994 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 SLC28A3Q9HAS3 691 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 UTYO14607 1347 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 LOC285556D6RIA3 1793 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 PLXNA1Q9UIW2 1896 aa7.92□□□□□ -1.14
HDAC6-210ENST00000441703 GRXCR1A8MXD5 290 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 PI4K2BG5E9Z4 385 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 SPP2Q13103 211 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 MAP2K5Q13163 448 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 SNX17Q15036 470 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 NCBP3Q53F19 620 aaKnown RBP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 WDR78Q5VTH9 848 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 CDC42EP5Q6NZY7 148 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 EDC3Q96F86 508 aaKnown RBP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 NAP1L5Q96NT1 182 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 PAGR1Q9BTK6 254 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 STK31Q9BXU1 1019 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 TBC1D2Q9BYX2 928 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 PDCL3Q9H2J4 239 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 TMEM39AQ9NV64 488 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 USP40Q9NVE5 1235 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 ISY1Q9ULR0 285 aaKnown RBP7.91□□□□□ -1.14
HDAC6-210ENST00000441703 COG5Q9UP83 839 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 LRRC37A2A6NM11 1700 aa7.91□□□□□ -1.14
HDAC6-210ENST00000441703 APBB1O00213 710 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 KIAA0355O15063 1070 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 GTPBP6O43824 516 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-210ENST00000441703 ST18O60284 1047 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 PQBP1O60828 265 aaKnown RBP7.9□□□□□ -1.14
HDAC6-210ENST00000441703 ITGB8P26012 769 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 ADCYAP1R1P41586 468 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 FOXO4P98177 505 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 PPIGQ13427 754 aaKnown RBP eCLIP7.9□□□□□ -1.141e-7■■■□□ 17.5
HDAC6-210ENST00000441703 C8orf34Q49A92 452 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 MORN1Q5T089 497 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 LINS1Q8NG48 757 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 GTF3C2Q8WUA4 911 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-210ENST00000441703 USP6NLQ92738 828 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 KHSRPQ92945 711 aaKnown RBP eCLIP7.9□□□□□ -1.14
HDAC6-210ENST00000441703 ZNF594Q96JF6 807 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-210ENST00000441703 FBXL18Q96ME1 805 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.9□□□□□ -1.145e-7■■■□□ 15.3
HDAC6-210ENST00000441703 NKX2-4Q9H2Z4 354 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 AS3MTQ9HBK9 375 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 TMOD4Q9NZQ9 345 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 DAGLAQ9Y4D2 1042 aa7.9□□□□□ -1.14
HDAC6-210ENST00000441703 ATRNL1Q5VV63 1379 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 SLC4A3P48751 1232 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 RGS3P49796 1198 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 HERVK_113P62684 666 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 ERVK-9P63128 1117 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 ERVK-24P63145 666 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 BECN1Q14457 450 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 WDR43Q15061 677 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC6-210ENST00000441703 C1orf53Q5VUE5 145 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 ANO1Q5XXA6 986 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 ZFPM1Q8IX07 1006 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 TSPYL6Q8N831 410 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 SLC44A5Q8NCS7 719 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 DNAAF4Q8WXU2 420 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 MTIF3Q9H2K0 278 aaKnown RBP7.89□□□□□ -1.15
HDAC6-210ENST00000441703 IVNS1ABPQ9Y6Y0 642 aa7.89□□□□□ -1.15
HDAC6-210ENST00000441703 DNAH12Q6ZR08 3092 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms