RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NOL7Q9UMY1 257 aaKnown RBP6.98□□□□□ -1.29
VPS50-205ENST00000441602 CYP2D6P10635 497 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 TGFB2P61812 414 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 FAM177A1Q8N128 213 aaPredicted RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 ENAHQ8N8S7 591 aaPredicted RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 TFIP11Q9UBB9 837 aaKnown RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 FLT1P17948 1338 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CHD4Q14839 1912 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 C16orf86Q6ZW13 317 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CRACR2BQ8N4Y2 399 aaPredicted RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 GPT2Q8TD30 523 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 ANKS1AQ92625 1134 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 MYL10Q9BUA6 226 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 NUP62CLQ9H1M0 184 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 DHX36Q9H2U1 1008 aaKnown RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 DBNDD1Q9H9R9 158 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 GRPEL1Q9HAV7 217 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 INCENPQ9NQS7 918 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 FSD2A1L4K1 749 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CTAGE5O15320 804 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 PRPF3O43395 683 aaKnown RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 BMP15O95972 392 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 FDPSP14324 419 aaKnown RBP6.97□□□□□ -1.29
VPS50-205ENST00000441602 RXRAP19793 462 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CRKP46108 304 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 LRSAM1Q6UWE0 723 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 NIM1KQ8IY84 436 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 LARGE2Q8N3Y3 721 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 NEDD1Q8NHV4 660 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 CCDC17Q96LX7 622 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 PSMD1Q99460 953 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 RTEL1Q9NZ71 1219 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 RCOR1Q9UKL0 485 aa6.97□□□□□ -1.29
VPS50-205ENST00000441602 TOP1P11387 765 aaKnown RBP6.96□□□□□ -1.29
VPS50-205ENST00000441602 CALML3P27482 149 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 CDC27P30260 824 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 CDK8P49336 464 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 KIF23Q02241 960 aaPredicted RBP6.96□□□□□ -1.29
VPS50-205ENST00000441602 FAM47AQ5JRC9 791 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 MYSM1Q5VVJ2 828 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 CCDC34Q96HJ3 373 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 MTFR1LQ9H019 292 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 PIM2Q9P1W9 311 aa6.96□□□□□ -1.29
VPS50-205ENST00000441602 MKRN1Q9UHC7 482 aaKnown RBP6.96□□□□□ -1.29
VPS50-205ENST00000441602 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 ME1P48163 572 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 MMP14P50281 582 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 RHBDL3P58872 404 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 PICALMQ13492 652 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 ZRSR1Q15695 479 aaKnown RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 TMTC3Q6ZXV5 915 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 CCDC148Q8NFR7 591 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 CCDC12Q8WUD4 166 aaPredicted RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 PHKBQ93100 1093 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 SERPINA10Q9UK55 444 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 LAMB1P07942 1786 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 C21orf2O43822 256 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 KINO60870 393 aaKnown RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 NTRK3Q16288 839 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 GRIK5Q16478 980 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 PNMA1Q8ND90 353 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 FOXP1Q9H334 677 aaPredicted RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.3
VPS50-205ENST00000441602 COL11A2P13942 1736 aaPredicted RBP6.96□□□□□ -1.3
VPS50-205ENST00000441602 LTBP1Q14766 1721 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 DPEP1P16444 411 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 SCNN1DP51172 638 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 MAP3K11Q16584 847 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 AOC3Q16853 763 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 TPRNQ4KMQ1 711 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 DALRD3Q5D0E6 543 aaKnown RBP6.95□□□□□ -1.3
VPS50-205ENST00000441602 RILPL1Q5EBL4 403 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 DACT2Q5SW24 774 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 ANO1Q5XXA6 986 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 DYNLL2Q96FJ2 89 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 SENP2Q9HC62 589 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 TMEM63CQ9P1W3 806 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 NAV1Q8NEY1 1877 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 SYCE3A1L190 88 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 SPTLC2O15270 562 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 CCDC192P0DO97 292 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 RASA1P20936 1047 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 KRT2P35908 639 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 GRM4Q14833 912 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 FAM173BQ6P4H8 233 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
VPS50-205ENST00000441602 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 OSBPL5Q9H0X9 879 aaPredicted RBP6.95□□□□□ -1.3
VPS50-205ENST00000441602 EHD4Q9H223 541 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 TNMDQ9H2S6 317 aa6.95□□□□□ -1.3
VPS50-205ENST00000441602 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms