RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 UBE2OQ9C0C9 1292 aaKnown RBP25.38■■□□□ 1.65
TRIM39-210ENST00000440271 RBPJLQ9UBG7 517 aa25.38■■□□□ 1.65
TRIM39-210ENST00000440271 TRMT44Q8IYL2 757 aaKnown RBP25.37■■□□□ 1.65
TRIM39-210ENST00000440271 STXBP5LQ9Y2K9 1186 aa25.37■■□□□ 1.65
TRIM39-210ENST00000440271 BAG3O95817 575 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 COL6A1P12109 1028 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 MAPK4P31152 587 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 CACNB2Q08289 660 aaPredicted RBP25.36■■□□□ 1.65
TRIM39-210ENST00000440271 PDE3AQ14432 1141 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 Q3C1V9 767 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 FOXP4Q8IVH2 680 aaPredicted RBP25.36■■□□□ 1.65
TRIM39-210ENST00000440271 USP6NLQ92738 828 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 MTMR10Q9NXD2 777 aa25.36■■□□□ 1.65
TRIM39-210ENST00000440271 AATFQ9NY61 560 aaKnown RBP eCLIP25.36■■□□□ 1.65
TRIM39-210ENST00000440271 USP17L10C9JJH3 530 aa25.35■■□□□ 1.65
TRIM39-210ENST00000440271 UQCRFS1P1P0C7P4 283 aa25.35■■□□□ 1.65
TRIM39-210ENST00000440271 ZKSCAN1P17029 563 aaPredicted RBP25.35■■□□□ 1.65
TRIM39-210ENST00000440271 METTL16Q86W50 562 aaKnown RBP25.35■■□□□ 1.65
TRIM39-210ENST00000440271 TGFBRAP1Q8WUH2 860 aa25.35■■□□□ 1.65
TRIM39-210ENST00000440271 DNAJC18Q9H819 358 aa25.35■■□□□ 1.65
TRIM39-210ENST00000440271 CUL9Q8IWT3 2517 aa25.35■■□□□ 1.65
TRIM39-210ENST00000440271 PLCG2P16885 1265 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 PPP4CP60510 307 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 SHROOM1Q2M3G4 852 aaPredicted RBP25.34■■□□□ 1.65
TRIM39-210ENST00000440271 LHX8Q68G74 356 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 NAA16Q6N069 864 aaPredicted RBP25.34■■□□□ 1.65
TRIM39-210ENST00000440271 MAPKAPK5Q8IW41 473 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 CCAR1Q8IX12 1150 aaKnown RBP25.34■■□□□ 1.65
TRIM39-210ENST00000440271 ARHGAP45Q92619 1136 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 PORCNQ9H237 461 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 GINM1Q9NU53 330 aa25.34■■□□□ 1.65
TRIM39-210ENST00000440271 GDF11O95390 407 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 CCND3P30281 292 aaPredicted RBP25.33■■□□□ 1.65
TRIM39-210ENST00000440271 ERVK-9P63128 1117 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 ERVK-24P63145 666 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 G3BP1Q13283 466 aaKnown RBP eCLIP25.33■■□□□ 1.65
TRIM39-210ENST00000440271 CCL14Q16627 93 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 GPR142Q7Z601 462 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 CRACR2BQ8N4Y2 399 aaPredicted RBP25.33■■□□□ 1.65
TRIM39-210ENST00000440271 TRIM34Q9BYJ4 488 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 SNRKQ9NRH2 765 aa25.33■■□□□ 1.65
TRIM39-210ENST00000440271 RGS2P41220 211 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 RARSP54136 660 aaKnown RBP25.32■■□□□ 1.64
TRIM39-210ENST00000440271 LRRC26Q2I0M4 334 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 MORN1Q5T089 497 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 POTEEQ6S8J3 1075 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 PLEKHH3Q7Z736 793 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 EMILIN3Q9NT22 766 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 PALD1Q9ULE6 856 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 SIPA1L1O43166 1804 aa25.32■■□□□ 1.64
TRIM39-210ENST00000440271 ADGRA1Q86SQ6 560 aa25.31■■□□□ 1.64
TRIM39-210ENST00000440271 GTF3C2Q8WUA4 911 aaPredicted RBP25.31■■□□□ 1.64
TRIM39-210ENST00000440271 PAGR1Q9BTK6 254 aa25.31■■□□□ 1.64
TRIM39-210ENST00000440271 ZBTB21Q9ULJ3 1066 aa25.31■■□□□ 1.64
TRIM39-210ENST00000440271 FLT1P17948 1338 aa25.31■■□□□ 1.64
TRIM39-210ENST00000440271 PNMA6EA0A0J9YXQ4 647 aa25.3■■□□□ 1.64
TRIM39-210ENST00000440271 GNAI2P04899 355 aa25.29■■□□□ 1.64
TRIM39-210ENST00000440271 MDM2Q00987 491 aaPredicted RBP25.29■■□□□ 1.64
TRIM39-210ENST00000440271 USP17L2Q6R6M4 530 aa25.29■■□□□ 1.64
TRIM39-210ENST00000440271 APBA2Q99767 749 aa25.29■■□□□ 1.64
TRIM39-210ENST00000440271 TTC39AQ5SRH9 613 aa25.28■■□□□ 1.64
TRIM39-210ENST00000440271 SAP30BPQ9UHR5 308 aaKnown RBP25.28■■□□□ 1.64
TRIM39-210ENST00000440271 CYP2E1P05181 493 aaPredicted RBP25.27■■□□□ 1.64
TRIM39-210ENST00000440271 MAP2K5Q13163 448 aa25.27■■□□□ 1.64
TRIM39-210ENST00000440271 CCDC158Q5M9N0 1113 aa25.27■■□□□ 1.64
TRIM39-210ENST00000440271 EDC3Q96F86 508 aaKnown RBP25.27■■□□□ 1.64
TRIM39-210ENST00000440271 CWC22Q9HCG8 908 aaKnown RBP25.27■■□□□ 1.64
TRIM39-210ENST00000440271 HLA-DOAP06340 250 aa25.26■■□□□ 1.63
TRIM39-210ENST00000440271 GPR108Q9NPR9 543 aa25.26■■□□□ 1.63
TRIM39-210ENST00000440271 RABGAP1Q9Y3P9 1069 aa25.26■■□□□ 1.63
TRIM39-210ENST00000440271 GH2P01242 217 aa25.25■■□□□ 1.63
TRIM39-210ENST00000440271 ATF7IPQ6VMQ6 1270 aa25.25■■□□□ 1.63
TRIM39-210ENST00000440271 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L15C9J2P7 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L13C9JLJ4 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L11C9JVI0 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L18D6R9N7 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L22D6RA61 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L17D6RBQ6 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L19D6RCP7 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L20D6RJB6 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 CNMDO75829 334 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 GLRX3O76003 335 aaKnown RBP25.24■■□□□ 1.63
TRIM39-210ENST00000440271 DYNLL1P63167 89 aaKnown RBP25.24■■□□□ 1.63
TRIM39-210ENST00000440271 CCNA1P78396 465 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 USP17L24Q0WX57 530 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 TNNI3KQ59H18 835 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 MFSD14CQ5VZR4 134 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 SENP6Q9GZR1 1112 aaPredicted RBP25.24■■□□□ 1.63
TRIM39-210ENST00000440271 FLRT1Q9NZU1 646 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 NDUFB9Q9Y6M9 179 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 FPGT-TNNI3KV9GXZ4 949 aa25.24■■□□□ 1.63
TRIM39-210ENST00000440271 POTEB2H3BUK9 544 aa25.23■■□□□ 1.63
TRIM39-210ENST00000440271 IGSF3O75054 1194 aa25.23■■□□□ 1.63
TRIM39-210ENST00000440271 ZYXQ15942 572 aaKnown RBP25.23■■□□□ 1.63
TRIM39-210ENST00000440271 C12orf42Q96LP6 360 aa25.23■■□□□ 1.63
TRIM39-210ENST00000440271 IPO8O15397 1037 aaKnown RBP25.22■■□□□ 1.63
TRIM39-210ENST00000440271 TRIM27P14373 513 aa25.22■■□□□ 1.63
TRIM39-210ENST00000440271 ZAP70P43403 619 aa25.22■■□□□ 1.63
TRIM39-210ENST00000440271 FAM109BQ6ICB4 259 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms