RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
LIMD1-202ENST00000440097 GRIK5Q16478 980 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 CATIPQ7Z7H3 387 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-202ENST00000440097 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
LIMD1-202ENST00000440097 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 USP17L8P0C7I0 530 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 IFNAR1P17181 557 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 TYRO3Q06418 890 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 PDE4BQ07343 736 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 AMOTL1Q8IY63 956 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 WASF1Q92558 559 aa16.32■□□□□ 0.2
LIMD1-202ENST00000440097 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 TNNT1P13805 278 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 SYCP1Q15431 976 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 POLLQ9UGP5 575 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 KINO60870 393 aaKnown RBP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 SAFBQ15424 915 aaKnown RBP eCLIP16.31■□□□□ 0.2
LIMD1-202ENST00000440097 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 CLSTN2Q9H4D0 955 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
LIMD1-202ENST00000440097 NMT2O60551 498 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 MTA3Q9BTC8 594 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 LDHCP07864 332 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 MMP10P09238 476 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 SEC23AQ15436 765 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 KCNG4Q8TDN1 519 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 CRAMP1Q96RY5 1269 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
LIMD1-202ENST00000440097 KCNJ14Q9UNX9 436 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
LIMD1-202ENST00000440097 SPTLC2O15270 562 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 G3V3G9 751 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 PLSCR1O15162 318 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 DCAF8Q5TAQ9 597 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 ANO1Q5XXA6 986 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 MKNK2Q9HBH9 465 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
LIMD1-202ENST00000440097 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 DDX41Q9UJV9 622 aaKnown RBP16.29■□□□□ 0.2
LIMD1-202ENST00000440097 A0A1B0GVL5 298 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 DEXIO95424 95 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 GABPB1Q06547 395 aaPredicted RBP16.28■□□□□ 0.2
LIMD1-202ENST00000440097 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
LIMD1-202ENST00000440097 CCDC112Q8NEF3 446 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
LIMD1-202ENST00000440097 TRIM5Q9C035 493 aa16.28■□□□□ 0.2
LIMD1-202ENST00000440097 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 BTDP43251 543 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 ZNF75DP51815 510 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 GTF2IP78347 998 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 DYNLL2Q96FJ2 89 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 F8W031 263 aaPredicted RBP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 YEATS4O95619 227 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 SDF4Q9BRK5 362 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 PDGFDQ9GZP0 370 aaPredicted RBP16.27■□□□□ 0.2
LIMD1-202ENST00000440097 MTMR7Q9Y216 660 aa16.27■□□□□ 0.2
LIMD1-202ENST00000440097 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.19
LIMD1-202ENST00000440097 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.19
LIMD1-202ENST00000440097 A0A087WWV3 80 aa16.26■□□□□ 0.19
LIMD1-202ENST00000440097 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
LIMD1-202ENST00000440097 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
LIMD1-202ENST00000440097 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
LIMD1-202ENST00000440097 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
LIMD1-202ENST00000440097 DIS3L2Q8IYB7 885 aaKnown RBP16.26■□□□□ 0.19
LIMD1-202ENST00000440097 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
LIMD1-202ENST00000440097 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
LIMD1-202ENST00000440097 PAXBP1Q9Y5B6 917 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms