RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 SLC45A1Q9Y2W3 748 aa25.07■■□□□ 1.6
VIL1-204ENST00000440053 MBD4O95243 580 aa25.06■■□□□ 1.6
VIL1-204ENST00000440053 FMNL1O95466 1100 aaPredicted RBP25.06■■□□□ 1.6
VIL1-204ENST00000440053 GH2P01242 217 aa25.06■■□□□ 1.6
VIL1-204ENST00000440053 SH3D19Q5HYK7 790 aa25.06■■□□□ 1.6
VIL1-204ENST00000440053 PROCA1Q8NCQ7 364 aaPredicted RBP25.06■■□□□ 1.6
VIL1-204ENST00000440053 OTUD7AQ8TE49 926 aaPredicted RBP25.06■■□□□ 1.6
VIL1-204ENST00000440053 DCP1AQ9NPI6 582 aaPredicted RBP25.06■■□□□ 1.6
VIL1-204ENST00000440053 ATAD5Q96QE3 1844 aa25.06■■□□□ 1.6
VIL1-204ENST00000440053 MYH1P12882 1939 aa25.05■■□□□ 1.6
VIL1-204ENST00000440053 BACE1P56817 501 aa25.05■■□□□ 1.6
VIL1-204ENST00000440053 TBC1D2Q9BYX2 928 aa25.05■■□□□ 1.6
VIL1-204ENST00000440053 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.05■■□□□ 1.6
VIL1-204ENST00000440053 EHD4Q9H223 541 aa25.05■■□□□ 1.6
VIL1-204ENST00000440053 PTPRFP10586 1907 aa25.05■■□□□ 1.6
VIL1-204ENST00000440053 SMIM22K7EJ46 135 aa25.04■■□□□ 1.6
VIL1-204ENST00000440053 MYCP01106 439 aaPredicted RBP25.04■■□□□ 1.6
VIL1-204ENST00000440053 OSBPP22059 807 aa25.04■■□□□ 1.6
VIL1-204ENST00000440053 SHMT1P34896 483 aa25.04■■□□□ 1.6
VIL1-204ENST00000440053 SMCR8Q8TEV9 937 aaPredicted RBP25.04■■□□□ 1.6
VIL1-204ENST00000440053 SH3TC2Q8TF17 1288 aa25.04■■□□□ 1.6
VIL1-204ENST00000440053 PUS7LQ9H0K6 701 aaKnown RBP25.04■■□□□ 1.6
VIL1-204ENST00000440053 POTEFA5A3E0 1075 aa25.03■■□□□ 1.6
VIL1-204ENST00000440053 CERKLQ49MI3 558 aaPredicted RBP25.03■■□□□ 1.6
VIL1-204ENST00000440053 ANKRD13CQ8N6S4 541 aa25.03■■□□□ 1.6
VIL1-204ENST00000440053 ARMC5Q96C12 935 aa25.03■■□□□ 1.6
VIL1-204ENST00000440053 USP17L10C9JJH3 530 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 UBE3CQ15386 1083 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 SLC9C1Q4G0N8 1177 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 GABPAQ06546 454 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 RAB3GAP1Q15042 981 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 DYNLL2Q96FJ2 89 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 ASCC2Q9H1I8 757 aaPredicted RBP25.02■■□□□ 1.6
VIL1-204ENST00000440053 SRRDQ9UH36 339 aa25.02■■□□□ 1.6
VIL1-204ENST00000440053 TNRC18O15417 2968 aaPredicted RBP25.01■■□□□ 1.59
VIL1-204ENST00000440053 CYP2D7A0A087X1C5 515 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 PEX10O60683 326 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 GNRH1P01148 92 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 ABCB5Q2M3G0 1257 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 ZNF333Q96JL9 665 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 EMILIN3Q9NT22 766 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 GINM1Q9NU53 330 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 GABRQQ9UN88 632 aa25.01■■□□□ 1.59
VIL1-204ENST00000440053 GUCY1A2P33402 732 aa25■■□□□ 1.59
VIL1-204ENST00000440053 ZYXQ15942 572 aaKnown RBP25■■□□□ 1.59
VIL1-204ENST00000440053 SLC44A5Q8NCS7 719 aa25■■□□□ 1.59
VIL1-204ENST00000440053 GPATCH3Q96I76 525 aa25■■□□□ 1.59
VIL1-204ENST00000440053 TMOD4Q9NZQ9 345 aa25■■□□□ 1.59
VIL1-204ENST00000440053 C19orf81C9J6K1 198 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 FCGRTP55899 365 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 PRKCZQ05513 592 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 ANKRD45Q5TZF3 282 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 KBTBD3Q8NAB2 608 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 ACER1Q8TDN7 264 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 P2RX7Q99572 595 aaKnown RBP24.99■■□□□ 1.59
VIL1-204ENST00000440053 PNMA3Q9UL41 463 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 SLC4A4Q9Y6R1 1079 aa24.99■■□□□ 1.59
VIL1-204ENST00000440053 BRCA2P51587 3418 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 HOXD10P28358 340 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 ZSCAN25Q6NSZ9 544 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 NBPF11Q86T75 865 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 ATP8A2Q9NTI2 1148 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 MYPNQ86TC9 1320 aa24.98■■□□□ 1.59
VIL1-204ENST00000440053 USP17L12C9JPN9 530 aa24.97■■□□□ 1.59
VIL1-204ENST00000440053 USP17L21D6R901 530 aa24.97■■□□□ 1.59
VIL1-204ENST00000440053 EN2P19622 333 aaPredicted RBP24.97■■□□□ 1.59
VIL1-204ENST00000440053 PABPC4Q13310 644 aaKnown RBP eCLIP24.97■■□□□ 1.59
VIL1-204ENST00000440053 SEPT2Q15019 361 aa24.97■■□□□ 1.59
VIL1-204ENST00000440053 PI4K2BQ8TCG2 481 aa24.97■■□□□ 1.59
VIL1-204ENST00000440053 OSBP2Q969R2 916 aa24.97■■□□□ 1.59
VIL1-204ENST00000440053 PRMT2P55345 433 aa24.96■■□□□ 1.59
VIL1-204ENST00000440053 RAET1EQ8TD07 263 aa24.96■■□□□ 1.59
VIL1-204ENST00000440053 CABP5Q9NP86 173 aa24.96■■□□□ 1.59
VIL1-204ENST00000440053 DDX60LQ5H9U9 1706 aaKnown RBP24.96■■□□□ 1.59
VIL1-204ENST00000440053 LOC285556D6RIA3 1793 aa24.96■■□□□ 1.59
VIL1-204ENST00000440053 MPHOSPH10O00566 681 aaKnown RBP24.96■■□□□ 1.59
VIL1-204ENST00000440053 RNF113AO15541 343 aaKnown RBP24.96■■□□□ 1.59
VIL1-204ENST00000440053 HOXA7P31268 230 aaPredicted RBP24.96■■□□□ 1.59
VIL1-204ENST00000440053 USP17L2Q6R6M4 530 aa24.96■■□□□ 1.59
VIL1-204ENST00000440053 STRBPQ96SI9 672 aaKnown RBP24.96■■□□□ 1.59
VIL1-204ENST00000440053 IRX3P78415 501 aaPredicted RBP24.95■■□□□ 1.58
VIL1-204ENST00000440053 C12orf60Q5U649 245 aa24.95■■□□□ 1.58
VIL1-204ENST00000440053 CTR9Q6PD62 1173 aa24.95■■□□□ 1.58
VIL1-204ENST00000440053 NAV1Q8NEY1 1877 aa24.95■■□□□ 1.58
VIL1-204ENST00000440053 TNPO2O14787 897 aaKnown RBP24.94■■□□□ 1.58
VIL1-204ENST00000440053 GCLCP48506 637 aaPredicted RBP24.94■■□□□ 1.58
VIL1-204ENST00000440053 HDAC1Q13547 482 aaPredicted RBP24.94■■□□□ 1.58
VIL1-204ENST00000440053 MTFR1Q15390 333 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 FAM110CQ1W6H9 321 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 POTEEQ6S8J3 1075 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 EXOC6Q8TAG9 804 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 FEZ1Q99689 392 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 TTC41PQ6P2S7 1318 aa24.94■■□□□ 1.58
VIL1-204ENST00000440053 FLT3LGP49771 235 aa24.93■■□□□ 1.58
VIL1-204ENST00000440053 TMEM106CQ9BVX2 250 aa24.93■■□□□ 1.58
VIL1-204ENST00000440053 TXNRD2Q9NNW7 524 aa24.93■■□□□ 1.58
VIL1-204ENST00000440053 A0A1W2PRG0 241 aa24.92■■□□□ 1.58
VIL1-204ENST00000440053 M0R2C6 588 aa24.92■■□□□ 1.58
VIL1-204ENST00000440053 AKR1B1P15121 316 aa24.92■■□□□ 1.58
VIL1-204ENST00000440053 MX1P20591 662 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms