RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 C4BP0C0L5 1744 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 CCDC24Q8N4L8 307 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 KCND1Q9NSA2 647 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 ZNF446Q9NWS9 450 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 NMT2O60551 498 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 ITPK1Q13572 414 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 ZNF174Q15697 407 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 TOGARAM2Q6ZUX3 1019 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 CREBRFQ8IUR6 639 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 REXO1L1PQ8IX06 675 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 ENAHQ8N8S7 591 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 ZBTB9Q96C00 473 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 L2HGDHQ9H9P8 463 aa15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 BAG1Q99933 345 aaPredicted RBP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 HOOK1Q9UJC3 728 aaKnown RBP15.5■□□□□ 0.07
HERPUD1-204ENST00000439977 CCDC196A0A1B0GTZ2 297 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 MTF1Q14872 753 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 CCDC93Q567U6 631 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 CARD6Q9BX69 1037 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 PPP2R2CQ9Y2T4 447 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 TEX33O43247 280 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 ACTN4O43707 911 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 CAMTA2O94983 1202 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 GNAT2P19087 354 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 KARSQ15046 597 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 TMEM139Q8IV31 216 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 ESR2Q92731 530 aa15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 IRX2Q9BZI1 471 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 SRPRBQ9Y5M8 271 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-204ENST00000439977 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 ZNF771Q7L3S4 317 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 WDR24Q96S15 920 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 RNF41Q9H4P4 317 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 KLRK1P26718 216 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 SIK1P57059 783 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 GNG11P61952 73 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 PKN1Q16512 942 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 TC2NQ8N9U0 490 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 PNPLA7Q6ZV29 1317 aa15.48■□□□□ 0.07
HERPUD1-204ENST00000439977 A0A0U1RQJ8 604 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 NTSR2O95665 410 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 MORC3Q14149 939 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 SEC23AQ15436 765 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 MNS1Q8NEH6 495 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 ATRIPQ8WXE1 791 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 SYMPKQ92797 1274 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 MYH7P12883 1935 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 USP17L12C9JPN9 530 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 USP17L21D6R901 530 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 ADAMTS3O15072 1205 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 SARSP49591 514 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 TMTC2Q8N394 836 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 MTMR7Q9Y216 660 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 KCNQ2O43526 872 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 CDC25AP30304 524 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 ERFEQ4G0M1 354 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 MLKLQ8NB16 471 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 UBXN4Q92575 508 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 GTPBP4Q9BZE4 634 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 BLZF1Q9H2G9 400 aa15.47■□□□□ 0.07
HERPUD1-204ENST00000439977 BAZ2BQ9UIF8 2168 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 GOLGB1Q14789 3259 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 ZNF18P17022 549 aa15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 CLCN6P51797 869 aa15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 ZNF384Q8TF68 577 aa15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 ZSWIM4Q9H7M6 989 aa15.46■□□□□ 0.07
HERPUD1-204ENST00000439977 ARHGAP6O43182 974 aa15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 UTP14CQ5TAP6 766 aaKnown RBP15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 KRT222Q8N1A0 295 aa15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 RIOK1Q9BRS2 568 aaKnown RBP15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 TFCP2L1Q9NZI6 479 aa15.46■□□□□ 0.06
HERPUD1-204ENST00000439977 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 CATIPQ7Z7H3 387 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 LZTFL1Q9NQ48 299 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.067e-8■□□□□ 11.2
HERPUD1-204ENST00000439977 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 LRP6O75581 1613 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 KRT2P35908 639 aa15.45■□□□□ 0.06
HERPUD1-204ENST00000439977 KCNJ6P48051 423 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms