RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 BIN2Q9UBW5 565 aaPredicted RBP19.5■□□□□ 0.71
ITGB1-207ENST00000439974 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 FLT3LGP49771 235 aa19.49■□□□□ 0.71
ITGB1-207ENST00000439974 DYNLL1P63167 89 aaKnown RBP19.49■□□□□ 0.71
ITGB1-207ENST00000439974 TSHZ3Q63HK5 1081 aa19.49■□□□□ 0.71
ITGB1-207ENST00000439974 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-207ENST00000439974 CRACR2BQ8N4Y2 399 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-207ENST00000439974 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
ITGB1-207ENST00000439974 WDR18Q9BV38 432 aa19.49■□□□□ 0.71
ITGB1-207ENST00000439974 ANTXR1Q9H6X2 564 aa19.49■□□□□ 0.71
ITGB1-207ENST00000439974 DOCK3Q8IZD9 2030 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 IGHDP01880 384 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 CCL5P13501 91 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 GCLCP48506 637 aaPredicted RBP19.48■□□□□ 0.71
ITGB1-207ENST00000439974 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 EDC3Q96F86 508 aaKnown RBP19.48■□□□□ 0.71
ITGB1-207ENST00000439974 GINM1Q9NU53 330 aa19.48■□□□□ 0.71
ITGB1-207ENST00000439974 SAP30BPQ9UHR5 308 aaKnown RBP19.48■□□□□ 0.71
ITGB1-207ENST00000439974 MYH1P12882 1939 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 ADCY3O60266 1144 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 GJB1P08034 283 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 BACE1P56817 501 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 IRF5Q13568 498 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 MTMR2Q13614 643 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 MIGA1Q8NAN2 632 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
ITGB1-207ENST00000439974 PXYLP1Q8TE99 480 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 COA7Q96BR5 231 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
ITGB1-207ENST00000439974 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 BOLA2Q9H3K6 86 aa19.47■□□□□ 0.71
ITGB1-207ENST00000439974 GDF11O95390 407 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 USP5P45974 858 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 GJA8P48165 433 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 JAG1P78504 1218 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 HDAC1Q13547 482 aaPredicted RBP19.46■□□□□ 0.71
ITGB1-207ENST00000439974 ASCC2Q9H1I8 757 aaPredicted RBP19.46■□□□□ 0.71
ITGB1-207ENST00000439974 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 ZBTB21Q9ULJ3 1066 aa19.46■□□□□ 0.71
ITGB1-207ENST00000439974 C19orf81C9J6K1 198 aa19.45■□□□□ 0.7
ITGB1-207ENST00000439974 ANKRD45Q5TZF3 282 aa19.45■□□□□ 0.7
ITGB1-207ENST00000439974 USP17L10C9JJH3 530 aa19.44■□□□□ 0.7
ITGB1-207ENST00000439974 GOLIM4O00461 696 aa19.44■□□□□ 0.7
ITGB1-207ENST00000439974 ELNP15502 786 aa19.44■□□□□ 0.7
ITGB1-207ENST00000439974 IRX3P78415 501 aaPredicted RBP19.44■□□□□ 0.7
ITGB1-207ENST00000439974 TTF1Q15361 905 aaPredicted RBP19.44■□□□□ 0.7
ITGB1-207ENST00000439974 B4GALNT3Q6L9W6 998 aa19.44■□□□□ 0.7
ITGB1-207ENST00000439974 UNC93B1Q9H1C4 597 aa19.44■□□□□ 0.7
ITGB1-207ENST00000439974 INHAP05111 366 aa19.43■□□□□ 0.7
ITGB1-207ENST00000439974 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-207ENST00000439974 SHROOM1Q2M3G4 852 aaPredicted RBP19.43■□□□□ 0.7
ITGB1-207ENST00000439974 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
ITGB1-207ENST00000439974 CEP290O15078 2479 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 AAMPQ13685 434 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 HABP4Q5JVS0 413 aaKnown RBP19.42■□□□□ 0.7
ITGB1-207ENST00000439974 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 U2AF1L4Q8WU68 220 aaKnown RBP19.42■□□□□ 0.7
ITGB1-207ENST00000439974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.42■□□□□ 0.7
ITGB1-207ENST00000439974 EHD4Q9H223 541 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-207ENST00000439974 MORF4L1Q9UBU8 362 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
ITGB1-207ENST00000439974 ATP5JP18859 108 aa19.41■□□□□ 0.7
ITGB1-207ENST00000439974 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
ITGB1-207ENST00000439974 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
ITGB1-207ENST00000439974 RIOK1Q9BRS2 568 aaKnown RBP19.41■□□□□ 0.7
ITGB1-207ENST00000439974 MAGEB6P1A0A0J9YX57 407 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 SGPL1O95470 568 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 GH2P01242 217 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 HERVK_113P62684 666 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 UBE2Q1Q7Z7E8 422 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 P2RX7Q99572 595 aaKnown RBP19.4■□□□□ 0.7
ITGB1-207ENST00000439974 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
ITGB1-207ENST00000439974 CHGBP05060 677 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 PDE6AP16499 860 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 CAPN2P17655 700 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 SLC9C2Q5TAH2 1124 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L2Q6R6M4 530 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 HAUS7Q99871 368 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 HTATIP2Q9BUP3 242 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 EMILIN3Q9NT22 766 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 PCDH10Q9P2E7 1040 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 DDX60LQ5H9U9 1706 aaKnown RBP19.39■□□□□ 0.69
ITGB1-207ENST00000439974 NAV1Q8NEY1 1877 aa19.39■□□□□ 0.69
ITGB1-207ENST00000439974 FARP2O94887 1054 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-207ENST00000439974 GPRC5AQ8NFJ5 357 aa19.38■□□□□ 0.69
ITGB1-207ENST00000439974 GTF3C2Q8WUA4 911 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-207ENST00000439974 DPF3Q92784 378 aa19.38■□□□□ 0.69
ITGB1-207ENST00000439974 FEZ1Q99689 392 aa19.38■□□□□ 0.69
ITGB1-207ENST00000439974 CRNKL1Q9BZJ0 848 aaKnown RBP19.38■□□□□ 0.69
ITGB1-207ENST00000439974 PAK6Q9NQU5 681 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-207ENST00000439974 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
ITGB1-207ENST00000439974 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-207ENST00000439974 GJD2Q9UKL4 321 aa19.38■□□□□ 0.69
ITGB1-207ENST00000439974 ZNF532Q9HCE3 1301 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 H0YGN5 161 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms