RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 GDF9O60383 454 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
COPS3-203ENST00000439936 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 ZNF384Q8TF68 577 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.1□□□□□ -0.95
COPS3-203ENST00000439936 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 ZDHHC15Q96MV8 337 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 BOLA2Q9H3K6 86 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 PIH1D3Q9NQM4 214 aaKnown RBP9.1□□□□□ -0.95
COPS3-203ENST00000439936 LRP2BPQ9P2M1 347 aa9.1□□□□□ -0.95
COPS3-203ENST00000439936 ZNF70Q9UC06 446 aaPredicted RBP9.1□□□□□ -0.95
COPS3-203ENST00000439936 TRPM7Q96QT4 1865 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 MAST3O60307 1309 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 ECM29Q5VYK3 1845 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 CLRN2A0PK11 232 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 ADM5C9JUS6 153 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 MYO1BO43795 1136 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 LDHCP07864 332 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 HSPA6P17066 643 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 MECOMQ03112 1051 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 CST9Q5W186 159 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 OTUD7AQ8TE49 926 aaPredicted RBP9.09□□□□□ -0.95
COPS3-203ENST00000439936 NSUN4Q96CB9 384 aaKnown RBP9.09□□□□□ -0.95
COPS3-203ENST00000439936 ECHDC1Q9NTX5 307 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 RAI14Q9P0K7 980 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 DAGLAQ9Y4D2 1042 aa9.09□□□□□ -0.95
COPS3-203ENST00000439936 PITPNM2Q9BZ72 1349 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 NUCB1Q02818 461 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 CDC42EP5Q6NZY7 148 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 DZIP1Q86YF9 867 aaKnown RBP9.08□□□□□ -0.96
COPS3-203ENST00000439936 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
COPS3-203ENST00000439936 DNAJC2Q99543 621 aaKnown RBP9.08□□□□□ -0.96
COPS3-203ENST00000439936 HAUS7Q99871 368 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
COPS3-203ENST00000439936 GPR75-ASB3A0A0A6YYF3 556 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 TMEM88BA6NKF7 163 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 TCP10L2B9ZVM9 353 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 GOLIM4O00461 696 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 GSTO1P78417 241 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 HTRA3P83110 453 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 TTF1Q15361 905 aaPredicted RBP9.07□□□□□ -0.96
COPS3-203ENST00000439936 TSHZ3Q63HK5 1081 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 APOBEC3FQ8IUX4 373 aaKnown RBP9.07□□□□□ -0.96
COPS3-203ENST00000439936 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
COPS3-203ENST00000439936 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 SPSB2Q99619 263 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 LNPKQ9C0E8 428 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 DEFB129Q9H1M3 183 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 VEZTQ9HBM0 779 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 USP40Q9NVE5 1235 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 PAG1Q9NWQ8 432 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 GAKO14976 1311 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 SALL3Q9BXA9 1300 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 AK9Q5TCS8 1911 aa9.07□□□□□ -0.96
COPS3-203ENST00000439936 IGSF3O75054 1194 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 IDH1O75874 414 aaKnown RBP9.06□□□□□ -0.96
COPS3-203ENST00000439936 CELF2O95319 508 aaKnown RBP9.06□□□□□ -0.96
COPS3-203ENST00000439936 CYP7A1P22680 504 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 CACNB3P54284 484 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 RASA3Q14644 834 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 NAA16Q6N069 864 aaPredicted RBP9.06□□□□□ -0.96
COPS3-203ENST00000439936 CHD1LQ86WJ1 897 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 ZNF408Q9H9D4 720 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 STAP2Q9UGK3 403 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 MROH7-TTC4A0A0A0MT08 1334 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
COPS3-203ENST00000439936 MX1P20591 662 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 BTDP43251 543 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 PDE1AP54750 535 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 RHBDL3P58872 404 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 MAP3K12Q12852 859 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 NBPF12Q5TAG4 269 aaPredicted RBP9.05□□□□□ -0.96
COPS3-203ENST00000439936 FKBP1CQ5VVH2 108 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 ADGRA1Q86SQ6 560 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 PLEKHM2Q8IWE5 1019 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 DNAJC5GQ8N7S2 189 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
COPS3-203ENST00000439936 DOCK2Q92608 1830 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 ERC2O15083 957 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 KDM4AO75164 1064 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 GLRX3O76003 335 aaKnown RBP9.04□□□□□ -0.96
COPS3-203ENST00000439936 MAP4K4O95819 1239 aaPredicted RBP9.04□□□□□ -0.96
COPS3-203ENST00000439936 NEFLP07196 543 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 TNNI2P48788 182 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 DYNLL1P63167 89 aaKnown RBP9.04□□□□□ -0.96
COPS3-203ENST00000439936 TCP10Q12799 353 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 NFIAQ12857 509 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
COPS3-203ENST00000439936 DEFB115Q30KQ5 88 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms