RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 DNAJC18Q9H819 358 aa22.77■■□□□ 1.24
CCDC78-204ENST00000439619 PAG1Q9NWQ8 432 aa22.77■■□□□ 1.24
CCDC78-204ENST00000439619 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
CCDC78-204ENST00000439619 ATP5JP18859 108 aa22.76■■□□□ 1.23
CCDC78-204ENST00000439619 EN2P19622 333 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-204ENST00000439619 UBXN2AP68543 259 aa22.76■■□□□ 1.23
CCDC78-204ENST00000439619 PRKCZQ05513 592 aa22.76■■□□□ 1.23
CCDC78-204ENST00000439619 SLAIN1Q8ND83 568 aa22.76■■□□□ 1.23
CCDC78-204ENST00000439619 RIOK1Q9BRS2 568 aaKnown RBP22.76■■□□□ 1.23
CCDC78-204ENST00000439619 ZNF532Q9HCE3 1301 aa22.76■■□□□ 1.23
CCDC78-204ENST00000439619 ASCC2Q9H1I8 757 aaPredicted RBP22.75■■□□□ 1.23
CCDC78-204ENST00000439619 BOLA2Q9H3K6 86 aa22.75■■□□□ 1.23
CCDC78-204ENST00000439619 CABP5Q9NP86 173 aa22.75■■□□□ 1.23
CCDC78-204ENST00000439619 HTTP42858 3142 aa22.74■■□□□ 1.23
CCDC78-204ENST00000439619 CERKLQ49MI3 558 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-204ENST00000439619 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
CCDC78-204ENST00000439619 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
CCDC78-204ENST00000439619 GPATCH3Q96I76 525 aa22.74■■□□□ 1.23
CCDC78-204ENST00000439619 FEZ1Q99689 392 aa22.74■■□□□ 1.23
CCDC78-204ENST00000439619 GH2P01242 217 aa22.73■■□□□ 1.23
CCDC78-204ENST00000439619 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
CCDC78-204ENST00000439619 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
CCDC78-204ENST00000439619 HAUS7Q99871 368 aa22.73■■□□□ 1.23
CCDC78-204ENST00000439619 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
CCDC78-204ENST00000439619 TNRC18O15417 2968 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-204ENST00000439619 HOXA7P31268 230 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-204ENST00000439619 ABCB5Q2M3G0 1257 aa22.72■■□□□ 1.23
CCDC78-204ENST00000439619 USP17L2Q6R6M4 530 aa22.72■■□□□ 1.23
CCDC78-204ENST00000439619 AMOTL1Q8IY63 956 aa22.72■■□□□ 1.23
CCDC78-204ENST00000439619 ADCY3O60266 1144 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 FLT3LGP49771 235 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 USP14P54578 494 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 IRF5Q13568 498 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 RAB3GAP1Q15042 981 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
CCDC78-204ENST00000439619 TAOK2Q9UL54 1235 aa22.71■■□□□ 1.23
CCDC78-204ENST00000439619 JAG1P78504 1218 aa22.7■■□□□ 1.22
CCDC78-204ENST00000439619 CCAR1Q8IX12 1150 aaKnown RBP22.7■■□□□ 1.22
CCDC78-204ENST00000439619 PXYLP1Q8TE99 480 aa22.7■■□□□ 1.22
CCDC78-204ENST00000439619 GABRQQ9UN88 632 aa22.7■■□□□ 1.22
CCDC78-204ENST00000439619 PHIPQ8WWQ0 1821 aa22.7■■□□□ 1.22
CCDC78-204ENST00000439619 TCRBV5S4A2TA0A5A2 114 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 ADD2P35612 726 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 PLCD1P51178 756 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 EDC3Q96F86 508 aaKnown RBP22.69■■□□□ 1.22
CCDC78-204ENST00000439619 RNF208Q9H0X6 261 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 ATP8A2Q9NTI2 1148 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 ECHDC1Q9NTX5 307 aa22.69■■□□□ 1.22
CCDC78-204ENST00000439619 FOCADQ5VW36 1801 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 CCL5P13501 91 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 UBE3CQ15386 1083 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 MTFR1Q15390 333 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 LCORLQ8N3X6 602 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 GPRC5AQ8NFJ5 357 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 SDR42E1Q8WUS8 393 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 DCTPP1Q9H773 170 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 ARMT1Q9H993 441 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 DCP1AQ9NPI6 582 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-204ENST00000439619 MORF4L1Q9UBU8 362 aa22.68■■□□□ 1.22
CCDC78-204ENST00000439619 ZSWIM8A7E2V4 1837 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 ATAD5Q96QE3 1844 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 MPHOSPH10O00566 681 aaKnown RBP22.67■■□□□ 1.22
CCDC78-204ENST00000439619 SMARCA5O60264 1052 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-204ENST00000439619 MBD4O95243 580 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 GJB1P08034 283 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 HERVK_113P62684 666 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 SHROOM1Q2M3G4 852 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-204ENST00000439619 P2RX7Q99572 595 aaKnown RBP22.67■■□□□ 1.22
CCDC78-204ENST00000439619 SWAP70Q9UH65 585 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 LOC285556D6RIA3 1793 aa22.67■■□□□ 1.22
CCDC78-204ENST00000439619 RBBP6Q7Z6E9 1792 aaKnown RBP22.67■■□□□ 1.22
CCDC78-204ENST00000439619 CAPN2P17655 700 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 SHMT1P34896 483 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 GCC1Q96CN9 775 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 KIAA1683Q9H0B3 1180 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 EMILIN3Q9NT22 766 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 PTPRFP10586 1907 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 MYO5AQ9Y4I1 1855 aaKnown RBP22.66■■□□□ 1.22
CCDC78-204ENST00000439619 SIPA1L1O43166 1804 aa22.66■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L15C9J2P7 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L13C9JLJ4 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L11C9JVI0 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L18D6R9N7 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L22D6RA61 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L17D6RBQ6 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L19D6RCP7 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L20D6RJB6 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 USP17L24Q0WX57 530 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 ZYXQ15942 572 aaKnown RBP22.65■■□□□ 1.22
CCDC78-204ENST00000439619 C12orf42Q96LP6 360 aa22.65■■□□□ 1.22
CCDC78-204ENST00000439619 CWC22Q9HCG8 908 aaKnown RBP22.65■■□□□ 1.22
CCDC78-204ENST00000439619 INHAP05111 366 aa22.64■■□□□ 1.21
CCDC78-204ENST00000439619 ELNP15502 786 aa22.64■■□□□ 1.21
CCDC78-204ENST00000439619 MAPK4P31152 587 aa22.64■■□□□ 1.21
CCDC78-204ENST00000439619 GJA8P48165 433 aa22.64■■□□□ 1.21
CCDC78-204ENST00000439619 GABPAQ06546 454 aa22.64■■□□□ 1.21
CCDC78-204ENST00000439619 LRRFIP1Q32MZ4 808 aaKnown RBP22.64■■□□□ 1.21
CCDC78-204ENST00000439619 ZBTB47Q9UFB7 747 aaPredicted RBP22.64■■□□□ 1.21
CCDC78-204ENST00000439619 CDK5RAP2Q96SN8 1893 aa22.63■■□□□ 1.21
CCDC78-204ENST00000439619 SLC4A4Q9Y6R1 1079 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms