RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 TNS4Q8IZW8 715 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 MS4A4AQ96JQ5 239 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 BEGAINQ9BUH8 593 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 ARPP21Q9UBL0 812 aaPredicted RBP23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 ZHX2Q9Y6X8 837 aa23.3■■□□□ 1.32
SEMA3B-206ENST00000439487 MINDY4BA8MYZ0 360 aa23.29■■□□□ 1.32
SEMA3B-206ENST00000439487 FOXP2O15409 715 aa23.29■■□□□ 1.32
SEMA3B-206ENST00000439487 GTF2A2P52657 109 aa23.29■■□□□ 1.32
SEMA3B-206ENST00000439487 SLC44A5Q8NCS7 719 aa23.29■■□□□ 1.32
SEMA3B-206ENST00000439487 NACAP1Q9BZK3 213 aa23.29■■□□□ 1.32
SEMA3B-206ENST00000439487 FOXN1O15353 648 aa23.28■■□□□ 1.32
SEMA3B-206ENST00000439487 CERKLQ49MI3 558 aaPredicted RBP23.28■■□□□ 1.32
SEMA3B-206ENST00000439487 CCDC171Q6TFL3 1326 aa23.28■■□□□ 1.32
SEMA3B-206ENST00000439487 CCL15-CCL14A0A0B4J2E2 113 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 INHBEP58166 350 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 CCL15Q16663 113 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 STK11IPQ8N1F8 1099 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 BRI3BPQ8WY22 251 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 NAPBQ9H115 298 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 RNF186Q9NXI6 227 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 KCNH4Q9UQ05 1017 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 AFG3L2Q9Y4W6 797 aa23.27■■□□□ 1.32
SEMA3B-206ENST00000439487 TESPA1A2RU30 521 aaPredicted RBP23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 IGF2BP3O00425 579 aaKnown RBP eCLIP23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 TRPA1O75762 1119 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 ASNSP08243 561 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 CDK8P49336 464 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 C16orf86Q6ZW13 317 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 IFNL1Q8IU54 200 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 PTPN18Q99952 460 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 SWAP70Q9UH65 585 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 TSKSQ9UJT2 592 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 ZBTB21Q9ULJ3 1066 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 CASP8AP2Q9UKL3 1982 aa23.26■■□□□ 1.31
SEMA3B-206ENST00000439487 USP17L5A8MUK1 530 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 GH2P01242 217 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 HSPD1P10809 573 aaKnown RBP23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 CETPP11597 493 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 CHMLP26374 656 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 GINM1Q9NU53 330 aa23.25■■□□□ 1.31
SEMA3B-206ENST00000439487 TRIM75PA6NK02 468 aa23.24■■□□□ 1.31
SEMA3B-206ENST00000439487 CXCL11O14625 94 aa23.24■■□□□ 1.31
SEMA3B-206ENST00000439487 MFAP1P55081 439 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-206ENST00000439487 IL25Q9H293 177 aa23.24■■□□□ 1.31
SEMA3B-206ENST00000439487 SPP2Q13103 211 aa23.23■■□□□ 1.31
SEMA3B-206ENST00000439487 ALX1Q15699 326 aa23.23■■□□□ 1.31
SEMA3B-206ENST00000439487 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
SEMA3B-206ENST00000439487 TAOK2Q9UL54 1235 aa23.23■■□□□ 1.31
SEMA3B-206ENST00000439487 MPHOSPH10O00566 681 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 CA12O43570 354 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 HSPA8P11142 646 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 PPARAQ07869 468 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 BMP2KLQ5H9B9 411 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 ZNF280CQ8ND82 737 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 AS3MTQ9HBK9 375 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 ROBO3Q96MS0 1386 aa23.22■■□□□ 1.31
SEMA3B-206ENST00000439487 BTBD19C9JJ37 291 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 FGAP02671 866 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 AKR1B1P15121 316 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 GUCY1A2P33402 732 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 CTCFP49711 727 aaPredicted RBP23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 MOGSQ13724 837 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 RAB3GAP1Q15042 981 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 FAM43AQ8N2R8 423 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 WDR18Q9BV38 432 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 TBC1D2Q9BYX2 928 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 SAGE1Q9NXZ1 904 aa23.21■■□□□ 1.31
SEMA3B-206ENST00000439487 LOC285556D6RIA3 1793 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 A0A0G2JLL6 359 aaPredicted RBP23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 TBC1D8O95759 1140 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 SEPT2Q15019 361 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 PRRT2Q7Z6L0 340 aaPredicted RBP23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 RUFY2Q8WXA3 655 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 MKNK2Q9HBH9 465 aa23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 GREB1LQ9C091 1923 aaPredicted RBP23.2■■□□□ 1.3
SEMA3B-206ENST00000439487 LAMA4Q16363 1823 aa23.19■■□□□ 1.3
SEMA3B-206ENST00000439487 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
SEMA3B-206ENST00000439487 LBX1P52954 281 aa23.19■■□□□ 1.3
SEMA3B-206ENST00000439487 CTDSPL2Q05D32 466 aa23.19■■□□□ 1.3
SEMA3B-206ENST00000439487 MYH4Q9Y623 1939 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 RAD50Q92878 1312 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 PRDM1O75626 825 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 RASA1P20936 1047 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 DGKZQ13574 1117 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 CCDC17Q96LX7 622 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 R3HDMLQ9H3Y0 253 aa23.18■■□□□ 1.3
SEMA3B-206ENST00000439487 SLC3A2P08195 630 aaKnown RBP23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 HMGCS2P54868 508 aa23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 MTMR2Q13614 643 aa23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 GPAT2Q6NUI2 795 aa23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 TMEM179Q6ZVK1 233 aa23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 FASTKD5Q7L8L6 764 aaKnown RBP23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 INCENPQ9NQS7 918 aa23.17■■□□□ 1.3
SEMA3B-206ENST00000439487 ZMYM6O95789 1325 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 USP17L10C9JJH3 530 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 SLC34A2O95436 690 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms