RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CRAMP1Q96RY5 1269 aa9.16□□□□□ -0.94
HMGB2-202ENST00000438704 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
HMGB2-202ENST00000438704 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
HMGB2-202ENST00000438704 ANTXR1Q9H6X2 564 aa9.16□□□□□ -0.94
HMGB2-202ENST00000438704 TFCP2L1Q9NZI6 479 aa9.16□□□□□ -0.94
HMGB2-202ENST00000438704 PNPLA7Q6ZV29 1317 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 IRS2Q9Y4H2 1338 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 K7ELQ4 463 aaPredicted RBP9.15□□□□□ -0.94
HMGB2-202ENST00000438704 PHKA1P46020 1223 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 PTH1RQ03431 593 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 FBXO33Q7Z6M2 555 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
HMGB2-202ENST00000438704 BRIP1Q9BX63 1249 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.15□□□□□ -0.945e-67■□□□□ 9.1
HMGB2-202ENST00000438704 ALDH8A1Q9H2A2 487 aaPredicted RBP9.15□□□□□ -0.94
HMGB2-202ENST00000438704 PALD1Q9ULE6 856 aa9.15□□□□□ -0.94
HMGB2-202ENST00000438704 RPAP1Q9BWH6 1393 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-202ENST00000438704 MYH7P12883 1935 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 BBOX1O75936 387 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 CYP2E1P05181 493 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-202ENST00000438704 ZAP70P43403 619 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 ZNF589Q86UQ0 364 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-202ENST00000438704 SPATA5Q8NB90 893 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 APPBP2Q92624 585 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 KDM4CQ9H3R0 1056 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 GNL3LQ9NVN8 582 aaKnown RBP9.14□□□□□ -0.95
HMGB2-202ENST00000438704 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 RBM8AQ9Y5S9 174 aaKnown RBP9.14□□□□□ -0.95
HMGB2-202ENST00000438704 SNX14Q9Y5W7 946 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 DOCK2Q92608 1830 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 EP400Q96L91 3159 aa9.14□□□□□ -0.95
HMGB2-202ENST00000438704 ZKSCAN1P17029 563 aaPredicted RBP9.13□□□□□ -0.95
HMGB2-202ENST00000438704 ADD2P35612 726 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGB2-202ENST00000438704 KCNMA1Q12791 1236 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 RASGRF1Q13972 1273 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 KRT32Q14532 448 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 SLC15A2Q16348 729 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 CCDC155Q8N6L0 562 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 RBM17Q96I25 401 aaKnown RBP9.13□□□□□ -0.95
HMGB2-202ENST00000438704 TTC14Q96N46 770 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 PODXL2Q9NZ53 605 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
HMGB2-202ENST00000438704 MAST3O60307 1309 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 ZMYM6O95789 1325 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 XDHP47989 1333 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 SLC35F4A4IF30 521 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 SLC27A2O14975 620 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 PSMA5P28066 241 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 KRT76Q01546 638 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 CUL4AQ13619 759 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 CAVIN4Q5BKX8 364 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
HMGB2-202ENST00000438704 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 FAM84BQ96KN1 310 aaPredicted RBP9.12□□□□□ -0.95
HMGB2-202ENST00000438704 PIH1D3Q9NQM4 214 aaKnown RBP9.12□□□□□ -0.95
HMGB2-202ENST00000438704 DENND2AQ9ULE3 1009 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 NDUFB9Q9Y6M9 179 aa9.12□□□□□ -0.95
HMGB2-202ENST00000438704 SALL1Q9NSC2 1324 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 TAF1P21675 1872 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 ANKRD31Q8N7Z5 1873 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 FIGNL2A6NMB9 653 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 HSPD1P10809 573 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 PDE6AP16499 860 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 BAG6P46379 1132 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 NEK4P51957 841 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 MAP3K12Q12852 859 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 ALX1Q15699 326 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 VPS53Q5VIR6 699 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 PRPF40BQ6NWY9 871 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 ERICH6Q7L0X2 663 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 INTS4Q96HW7 963 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
HMGB2-202ENST00000438704 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 DUOX1Q9NRD9 1551 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
HMGB2-202ENST00000438704 RNF225M0QZC1 329 aaPredicted RBP9.1□□□□□ -0.95
HMGB2-202ENST00000438704 NPHP1O15259 732 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 FOXP2O15409 715 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 AP1G2O75843 785 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 SRGNP10124 158 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 NPR1P16066 1061 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 ATP2B4P23634 1241 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 PDE6BP35913 854 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 PI16Q6UXB8 463 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 SP8Q8IXZ3 490 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 CNTNAP3BQ96NU0 1288 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 CNTNAP3Q9BZ76 1288 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 FAM117AQ9C073 453 aa9.1□□□□□ -0.95
HMGB2-202ENST00000438704 GPBP1L1Q9HC44 474 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms