RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 CEP63Q96MT8 703 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 KDRP35968 1356 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 VIMP08670 466 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 EPB41P11171 864 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 SPATA5Q8NB90 893 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 A0A1W2PQ27 194 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 A0A1W2PQ64 194 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 A0A1W2PQD8 194 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 SCRN1Q12765 414 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 SEL1L2Q5TEA6 688 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 FBXO18Q8NFZ0 1043 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 ZC3H12CQ9C0D7 883 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 ASIC2Q16515 512 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 CACTINQ8WUQ7 758 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 IMPG2Q9BZV3 1241 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 PAK2Q13177 524 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 PLS1Q14651 629 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 TEX11Q8IYF3 940 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 ZNF827Q17R98 1081 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 CFAP221Q4G0U5 840 aa12.48□□□□□ -0.41
SEMA4D-211ENST00000438547 CEP104O60308 925 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 TCHPQ9BT92 498 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 FRMD4BQ9Y2L6 1034 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 FGAP02671 866 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 GPIHBP1Q8IV16 184 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 NKIRAS1Q9NYS0 192 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 CDC25BP30305 580 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 KLHL7Q8IXQ5 586 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 ORAI2Q96SN7 254 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
SEMA4D-211ENST00000438547 ADCY9O60503 1353 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 IFIH1Q9BYX4 1025 aaKnown RBP12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 ADGBQ8N7X0 1667 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 BTBD18B2RXH4 712 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 SPOPO43791 374 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 DYMQ7RTS9 669 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 TSNARE1Q96NA8 513 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 CLIC6Q96NY7 704 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 SMC6Q96SB8 1091 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 TRIM31Q9BZY9 425 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 COPRSQ9NQ92 184 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 SYNMO15061 1565 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 ERCC3P19447 782 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 CABP7Q86V35 215 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 CABS1Q96KC9 395 aa12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 FAM207AQ9NSI2 230 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-211ENST00000438547 MYOM2P54296 1465 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 STX10O60499 249 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 ARID4AP29374 1257 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 ARHGAP25P42331 645 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 MAP3K9P80192 1104 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 RSRC1Q96IZ7 334 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.42
SEMA4D-211ENST00000438547 KCNJ18B7U540 433 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 CYP21A2P08686 494 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 KCNJ12Q14500 433 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 NBPF14Q5TI25 921 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 HAUS3Q68CZ6 603 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 ZMYM6O95789 1325 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 RRAGAQ7L523 313 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 TCIRG1Q13488 830 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 MROH5Q6ZUA9 1318 aa12.45□□□□□ -0.42
SEMA4D-211ENST00000438547 SPATA1Q5VX52 437 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms