RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 MIGA1Q8NAN2 632 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 HOOK2Q96ED9 719 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 LRRCC1Q9C099 1032 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 MCOLN1Q9GZU1 580 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 BOLA2Q9H3K6 86 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 DNAJC18Q9H819 358 aa10.4□□□□□ -0.74
HERPUD2-206ENST00000438224 TCRBV5S4A2TA0A5A2 114 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 MAP4K4O95819 1239 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 PDE6AP16499 860 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 ATP5JP18859 108 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 JAG1P78504 1218 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 CRHR2Q13324 411 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 PPIL2Q13356 520 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 DGKZQ13574 1117 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 OTUD7AQ8TE49 926 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 ABHD8Q96I13 439 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 RIOK1Q9BRS2 568 aaKnown RBP10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 KCNH4Q9UQ05 1017 aa10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 KIAA0100Q14667 2235 aaKnown RBP10.39□□□□□ -0.75
HERPUD2-206ENST00000438224 GTF2A2P52657 109 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 INHBEP58166 350 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 PPATQ06203 517 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 MCM6Q14566 821 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 SCYL3Q8IZE3 742 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 HAUS7Q99871 368 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 PAG1Q9NWQ8 432 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 SAP30BPQ9UHR5 308 aaKnown RBP10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 PALD1Q9ULE6 856 aa10.38□□□□□ -0.75
HERPUD2-206ENST00000438224 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 TBC1D12O60347 775 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 IGSF3O75054 1194 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 SLC34A2O95436 690 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 BAG3O95817 575 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 PLCG2P16885 1265 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 PTPRAP18433 802 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 KCTD17Q8N5Z5 321 aa10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERPUD2-206ENST00000438224 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 CTNND1O60716 968 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 FKTNO75072 461 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 CETPP11597 493 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 ADD2P35612 726 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 SLC9C2Q5TAH2 1124 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 CTU1Q7Z7A3 348 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 METTL16Q86W50 562 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 LCORLQ8N3X6 602 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
HERPUD2-206ENST00000438224 ADGRA2Q96PE1 1338 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 CAP2P40123 477 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 GPAT2Q6NUI2 795 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 PI4KBQ9UBF8 816 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 ZHX2Q9Y6X8 837 aa10.35□□□□□ -0.75
HERPUD2-206ENST00000438224 CENPFP49454 3210 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 A0A0G2JLL6 359 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PRKAB2O43741 272 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 MBD4O95243 580 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 TMED8Q6PL24 325 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PRRT2Q7Z6L0 340 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 CD99L2Q8TCZ2 262 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 SDR42E1Q8WUS8 393 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 HERC5Q9UII4 1024 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PARP14Q460N5 1801 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 GREB1LQ9C091 1923 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
HERPUD2-206ENST00000438224 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 RLFQ13129 1914 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 TRIM75PA6NK02 468 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 PDHXO00330 501 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 CXCL11O14625 94 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 GDF11O95390 407 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 CYP2D6P10635 497 aa10.33□□□□□ -0.76
HERPUD2-206ENST00000438224 CTGFP29279 349 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms