RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 CNNM4Q6P4Q7 775 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 IGSF22Q8N9C0 903 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 SDR42E1Q8WUS8 393 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 DCTPP1Q9H773 170 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 MLXIPQ9HAP2 919 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 DNM3Q9UQ16 869 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 GYG1P46976 350 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 MFSD14BQ5SR56 506 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 BAG1Q99933 345 aaPredicted RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 APOL6Q9BWW8 343 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 TBC1D31Q96DN5 1066 aa11.52□□□□□ -0.56
SHPRH-206ENST00000438092 STMN4Q9H169 189 aaPredicted RBP11.52□□□□□ -0.56
SHPRH-206ENST00000438092 EXOC3O60645 756 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 BAG6P46379 1132 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 PLCD1P51178 756 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 KIAA1524Q8TCG1 905 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 SYNJ2BP-COX16A0A087WUM0 186 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 CAVIN2O95810 425 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 ITIH3Q06033 890 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 COX16Q9P0S2 106 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
SHPRH-206ENST00000438092 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 C2CD5Q86YS7 1000 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
SHPRH-206ENST00000438092 ANGEL1Q9UNK9 670 aaKnown RBP11.52□□□□□ -0.57
SHPRH-206ENST00000438092 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 CYP2J2P51589 502 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 CEP57Q86XR8 500 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 MICALL1Q8N3F8 863 aa11.52□□□□□ -0.57
SHPRH-206ENST00000438092 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 GMNNO75496 209 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 CAPN2P17655 700 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 APPBP2Q92624 585 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TAB2Q9NYJ8 693 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 KCNH3Q9ULD8 1083 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 THRAP3Q9Y2W1 955 aaKnown RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 LIN9Q5TKA1 542 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 MMS19Q96T76 1030 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 USP19O94966 1318 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 FMNL3Q8IVF7 1028 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 MAST3O60307 1309 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 SCYL2Q6P3W7 929 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 CCDC121Q6ZUS5 278 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 LPIN2Q92539 896 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 NAP1L3Q99457 506 aaPredicted RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TRIM37O94972 964 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 ARID4AP29374 1257 aaPredicted RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 ALDH1B1P30837 517 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 ITKQ08881 620 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 GSDMBQ8TAX9 411 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 CCDC110Q8TBZ0 833 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 USP26Q9BXU7 913 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 EXOC7Q9UPT5 735 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 CUL4BQ13620 913 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TRMT44Q8IYL2 757 aaKnown RBP11.51□□□□□ -0.57
SHPRH-206ENST00000438092 MAP3K1Q13233 1512 aa11.51□□□□□ -0.57
SHPRH-206ENST00000438092 TRAPPC8Q9Y2L5 1435 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
SHPRH-206ENST00000438092 NAA25Q14CX7 972 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 VAV2P52735 878 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 TNNC1P63316 161 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 NLRX1Q86UT6 975 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 CABP7Q86V35 215 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 TRPM2O94759 1503 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 CETN3O15182 167 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 SEPT10Q9P0V9 454 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 CTTNBP2NLQ9P2B4 639 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 JAK2O60674 1132 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 BCAMP50895 628 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 MYL5Q02045 173 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 DCPSQ96C86 337 aaKnown RBP11.5□□□□□ -0.57
SHPRH-206ENST00000438092 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
SHPRH-206ENST00000438092 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHPRH-206ENST00000438092 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
SHPRH-206ENST00000438092 NAP1L4Q99733 375 aaKnown RBP11.49□□□□□ -0.57
SHPRH-206ENST00000438092 KCNQ3O43525 872 aa11.49□□□□□ -0.57
SHPRH-206ENST00000438092 GAS7O60861 476 aa11.49□□□□□ -0.57
SHPRH-206ENST00000438092 UBXN2AP68543 259 aa11.49□□□□□ -0.57
SHPRH-206ENST00000438092 SPICE1Q8N0Z3 855 aa11.49□□□□□ -0.57
SHPRH-206ENST00000438092 KRT222Q8N1A0 295 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms