RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 ATP8B2P98198 1209 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 TMEM57Q8N5G2 664 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 SSH3Q8TE77 659 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 TRIB2Q92519 343 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 ZNF512BQ96KM6 892 aaPredicted RBP21.23■□□□□ 0.99
PTCH2-202ENST00000438067 TXNRD2Q9NNW7 524 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 GINM1Q9NU53 330 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
PTCH2-202ENST00000438067 LAMA3Q16787 3333 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 CYP2B6P20813 491 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 ZAP70P43403 619 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 MNX1P50219 401 aaPredicted RBP21.22■□□□□ 0.99
PTCH2-202ENST00000438067 HERVK_113P62684 666 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 OS9Q13438 667 aaPredicted RBP21.22■□□□□ 0.99
PTCH2-202ENST00000438067 TRIM34Q9BYJ4 488 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 NBPF3Q9H094 633 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 RBPJLQ9UBG7 517 aa21.22■□□□□ 0.99
PTCH2-202ENST00000438067 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
PTCH2-202ENST00000438067 SOX1O00570 391 aaPredicted RBP21.21■□□□□ 0.99
PTCH2-202ENST00000438067 IGSF3O75054 1194 aa21.21■□□□□ 0.99
PTCH2-202ENST00000438067 SURF6O75683 361 aaKnown RBP21.21■□□□□ 0.99
PTCH2-202ENST00000438067 GDF11O95390 407 aa21.21■□□□□ 0.99
PTCH2-202ENST00000438067 XRCC5P13010 732 aaKnown RBP21.21■□□□□ 0.99
PTCH2-202ENST00000438067 MAP3K21Q5TCX8 1036 aa21.21■□□□□ 0.99
PTCH2-202ENST00000438067 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
PTCH2-202ENST00000438067 PIH1D3Q9NQM4 214 aaKnown RBP21.21■□□□□ 0.99
PTCH2-202ENST00000438067 ZBTB21Q9ULJ3 1066 aa21.21■□□□□ 0.99
PTCH2-202ENST00000438067 DYNLL1P63167 89 aaKnown RBP21.2■□□□□ 0.98
PTCH2-202ENST00000438067 Q3C1V9 767 aa21.2■□□□□ 0.98
PTCH2-202ENST00000438067 ZKSCAN2Q63HK3 967 aa21.2■□□□□ 0.98
PTCH2-202ENST00000438067 C7orf61Q8IZ16 206 aa21.2■□□□□ 0.98
PTCH2-202ENST00000438067 GDF15Q99988 308 aa21.2■□□□□ 0.98
PTCH2-202ENST00000438067 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
PTCH2-202ENST00000438067 PRKAR2AP13861 404 aaKnown RBP21.19■□□□□ 0.98
PTCH2-202ENST00000438067 MAPK4P31152 587 aa21.19■□□□□ 0.98
PTCH2-202ENST00000438067 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
PTCH2-202ENST00000438067 LRCH3Q96II8 777 aa21.19■□□□□ 0.98
PTCH2-202ENST00000438067 EMILIN3Q9NT22 766 aa21.19■□□□□ 0.98
PTCH2-202ENST00000438067 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
PTCH2-202ENST00000438067 HLA-DOAP06340 250 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 CYP7A1P22680 504 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 BMP8BP34820 402 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 POTEEQ6S8J3 1075 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 USP6NLQ92738 828 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 C11orf49Q9H6J7 331 aa21.18■□□□□ 0.98
PTCH2-202ENST00000438067 ZMYND8Q9ULU4 1186 aaPredicted RBP21.18■□□□□ 0.98
PTCH2-202ENST00000438067 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
PTCH2-202ENST00000438067 ERVK-9P63128 1117 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 ERVK-24P63145 666 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 PDE3AQ14432 1141 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 USP17L2Q6R6M4 530 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 CCAR1Q8IX12 1150 aaKnown RBP21.17■□□□□ 0.98
PTCH2-202ENST00000438067 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
PTCH2-202ENST00000438067 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
PTCH2-202ENST00000438067 PORCNQ9H237 461 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
PTCH2-202ENST00000438067 ATAD5Q96QE3 1844 aa21.17■□□□□ 0.98
PTCH2-202ENST00000438067 SIPA1L1O43166 1804 aa21.16■□□□□ 0.98
PTCH2-202ENST00000438067 GH2P01242 217 aa21.16■□□□□ 0.98
PTCH2-202ENST00000438067 CACNB2Q08289 660 aaPredicted RBP21.16■□□□□ 0.98
PTCH2-202ENST00000438067 GTF3C2Q8WUA4 911 aaPredicted RBP21.16■□□□□ 0.98
PTCH2-202ENST00000438067 EAF2Q96CJ1 260 aaPredicted RBP21.16■□□□□ 0.98
PTCH2-202ENST00000438067 PAGR1Q9BTK6 254 aa21.16■□□□□ 0.98
PTCH2-202ENST00000438067 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
PTCH2-202ENST00000438067 ZKSCAN1P17029 563 aaPredicted RBP21.15■□□□□ 0.98
PTCH2-202ENST00000438067 MORN1Q5T089 497 aa21.15■□□□□ 0.98
PTCH2-202ENST00000438067 TATDN1Q6P1N9 297 aa21.15■□□□□ 0.98
PTCH2-202ENST00000438067 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
PTCH2-202ENST00000438067 PLEKHH3Q7Z736 793 aa21.15■□□□□ 0.98
PTCH2-202ENST00000438067 MIGA1Q8NAN2 632 aa21.15■□□□□ 0.98
PTCH2-202ENST00000438067 SYN1P17600 705 aa21.14■□□□□ 0.97
PTCH2-202ENST00000438067 RGS2P41220 211 aa21.14■□□□□ 0.97
PTCH2-202ENST00000438067 CCL14Q16627 93 aa21.14■□□□□ 0.97
PTCH2-202ENST00000438067 A0A0C4DFX4 3053 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 PLXNB2O15031 1838 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 PFASO15067 1338 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 USP5P45974 858 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 LHX8Q68G74 356 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 CERS3Q8IU89 383 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 MAGEB6Q8N7X4 407 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 C12orf42Q96LP6 360 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 RABGAP1Q9Y3P9 1069 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 COL6A3P12111 3177 aa21.13■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 COL6A1P12109 1028 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 CCND3P30281 292 aaPredicted RBP21.12■□□□□ 0.97
PTCH2-202ENST00000438067 MAGEA10P43363 369 aaPredicted RBP21.12■□□□□ 0.97
PTCH2-202ENST00000438067 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
PTCH2-202ENST00000438067 ZYXQ15942 572 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms