RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
TNFRSF1A-203ENST00000437813 PNMA3Q9UL41 463 aa17.59■□□□□ 0.41
TNFRSF1A-203ENST00000437813 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
TNFRSF1A-203ENST00000437813 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 ELNP15502 786 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 HABP4Q5JVS0 413 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 CERS3Q8IU89 383 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 MAGEB6Q8N7X4 407 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 GCC1Q96CN9 775 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 UNC93B1Q9H1C4 597 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 EHD4Q9H223 541 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-203ENST00000437813 GDF11O95390 407 aa17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 NKX2-3Q8TAU0 364 aa17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 AS3MTQ9HBK9 375 aa17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-203ENST00000437813 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 C19orf81C9J6K1 198 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 MAP3K12Q12852 859 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 TXNRD2Q9NNW7 524 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 EMILIN3Q9NT22 766 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 NAV1Q8NEY1 1877 aa17.56■□□□□ 0.4
TNFRSF1A-203ENST00000437813 USP17L10C9JJH3 530 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 INHAP05111 366 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 MS4A1P11836 297 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 UBXN2AP68543 259 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 GABPAQ06546 454 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PABPC4Q13310 644 aaKnown RBP eCLIP17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 CRACR2BQ8N4Y2 399 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PEX10O60683 326 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 SGPL1O95470 568 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PDE6AP16499 860 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 SHMT1P34896 483 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PLCD1P51178 756 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 COA7Q96BR5 231 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 C12orf42Q96LP6 360 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RBPJLQ9UBG7 517 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 SERPINB13Q9UIV8 391 aa17.54■□□□□ 0.4
TNFRSF1A-203ENST00000437813 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 H0YGN5 161 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 GH2P01242 217 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 HERVK_113P62684 666 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 EVX2Q03828 476 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 PCDH10Q9P2E7 1040 aa17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-203ENST00000437813 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 CLASRPQ8N2M8 674 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 USP6NLQ92738 828 aa17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 EDC3Q96F86 508 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RLFQ13129 1914 aa17.52■□□□□ 0.4
TNFRSF1A-203ENST00000437813 RAB11FIP3O75154 756 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 USP5P45974 858 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MAP3K21Q5TCX8 1036 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 KIAA1683Q9H0B3 1180 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 PRO3102Q9H379 93 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 TMOD4Q9NZQ9 345 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MYH7P12883 1935 aa17.51■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 HMMRO75330 724 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 FARP2O94887 1054 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CAPN2P17655 700 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ATP5JP18859 108 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 FXR1P51114 621 aaKnown RBP eCLIP17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 TRIM32Q13049 653 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 Q3C1V9 767 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 TTC6Q86TZ1 520 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ACER1Q8TDN7 264 aa17.5■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 GOLIM4O00461 696 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CNMDO75829 334 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 HMGCRP04035 888 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 XRCC5P13010 732 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 GPRC5AQ8NFJ5 357 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 TRIB2Q92519 343 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 DEFB118Q96PH6 123 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms