RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 TRIOBPQ9H2D6 2365 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 GDF11O95390 407 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 AACSQ86V21 672 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 CRACR2BQ8N4Y2 399 aaPredicted RBP24.66■■□□□ 1.54
COL6A2-206ENST00000436769 MAGEB6Q8N7X4 407 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 MIGA1Q8NAN2 632 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 U2AF1L4Q8WU68 220 aaKnown RBP24.66■■□□□ 1.54
COL6A2-206ENST00000436769 COA7Q96BR5 231 aa24.66■■□□□ 1.54
COL6A2-206ENST00000436769 INHAP05111 366 aa24.65■■□□□ 1.54
COL6A2-206ENST00000436769 HOXA7P31268 230 aaPredicted RBP24.65■■□□□ 1.54
COL6A2-206ENST00000436769 GJD2Q9UKL4 321 aa24.65■■□□□ 1.54
COL6A2-206ENST00000436769 ZBTB21Q9ULJ3 1066 aa24.65■■□□□ 1.54
COL6A2-206ENST00000436769 C19orf81C9J6K1 198 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 H0YGN5 161 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 SGPL1O95470 568 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 RHPN1Q8TCX5 695 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 IL1RAPL2Q9NP60 686 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 MORF4L1Q9UBU8 362 aa24.64■■□□□ 1.54
COL6A2-206ENST00000436769 PLXNB2O15031 1838 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 USP17L10C9JJH3 530 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 HLA-DOAP06340 250 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 MAP3K12Q12852 859 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 TATDN1Q6P1N9 297 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 TMED8Q6PL24 325 aaPredicted RBP24.63■■□□□ 1.53
COL6A2-206ENST00000436769 CERS3Q8IU89 383 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 SIRT2Q8IXJ6 389 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 P2RX7Q99572 595 aaKnown RBP24.63■■□□□ 1.53
COL6A2-206ENST00000436769 TRIM34Q9BYJ4 488 aa24.63■■□□□ 1.53
COL6A2-206ENST00000436769 COLQQ9Y215 455 aaPredicted RBP24.63■■□□□ 1.53
COL6A2-206ENST00000436769 HSP90AB4PQ58FF6 505 aa24.62■■□□□ 1.53
COL6A2-206ENST00000436769 RIOK1Q9BRS2 568 aaKnown RBP24.62■■□□□ 1.53
COL6A2-206ENST00000436769 PAK6Q9NQU5 681 aaPredicted RBP24.62■■□□□ 1.53
COL6A2-206ENST00000436769 TMOD4Q9NZQ9 345 aa24.62■■□□□ 1.53
COL6A2-206ENST00000436769 MS4A1P11836 297 aa24.61■■□□□ 1.53
COL6A2-206ENST00000436769 RPAP2Q8IXW5 612 aaPredicted RBP24.61■■□□□ 1.53
COL6A2-206ENST00000436769 EMILIN3Q9NT22 766 aa24.61■■□□□ 1.53
COL6A2-206ENST00000436769 ZBTB40Q9NUA8 1239 aa24.61■■□□□ 1.53
COL6A2-206ENST00000436769 PEX10O60683 326 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 USP5P45974 858 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 IRX3P78415 501 aaPredicted RBP24.6■■□□□ 1.53
COL6A2-206ENST00000436769 POTEEQ6S8J3 1075 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 EHD4Q9H223 541 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 TXNRD2Q9NNW7 524 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 TAOK2Q9UL54 1235 aa24.6■■□□□ 1.53
COL6A2-206ENST00000436769 GH2P01242 217 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 HERVK_113P62684 666 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 DPF3Q92784 378 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 DEFB118Q96PH6 123 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 CRISPLD2Q9H0B8 497 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 RBPJLQ9UBG7 517 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 SERPINB13Q9UIV8 391 aa24.59■■□□□ 1.53
COL6A2-206ENST00000436769 FXR1P51114 621 aaKnown RBP eCLIP24.58■■□□□ 1.53
COL6A2-206ENST00000436769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.58■■□□□ 1.53
COL6A2-206ENST00000436769 KIF1BPQ96EK5 621 aa24.58■■□□□ 1.53
COL6A2-206ENST00000436769 COG6Q9Y2V7 657 aa24.58■■□□□ 1.53
COL6A2-206ENST00000436769 FARP2O94887 1054 aaPredicted RBP24.57■■□□□ 1.52
COL6A2-206ENST00000436769 CAPN2P17655 700 aa24.57■■□□□ 1.52
COL6A2-206ENST00000436769 PLCD1P51178 756 aa24.57■■□□□ 1.52
COL6A2-206ENST00000436769 Q3C1V9 767 aa24.57■■□□□ 1.52
COL6A2-206ENST00000436769 TTC6Q86TZ1 520 aa24.57■■□□□ 1.52
COL6A2-206ENST00000436769 CLASRPQ8N2M8 674 aaKnown RBP24.57■■□□□ 1.52
COL6A2-206ENST00000436769 DDX19BQ9UMR2 479 aa24.57■■□□□ 1.52
COL6A2-206ENST00000436769 DDX60LQ5H9U9 1706 aaKnown RBP24.57■■□□□ 1.52
COL6A2-206ENST00000436769 LAMA3Q16787 3333 aa24.56■■□□□ 1.52
COL6A2-206ENST00000436769 TFRCP02786 760 aaKnown RBP24.56■■□□□ 1.52
COL6A2-206ENST00000436769 TTF1Q15361 905 aaPredicted RBP24.56■■□□□ 1.52
COL6A2-206ENST00000436769 USP17L2Q6R6M4 530 aa24.56■■□□□ 1.52
COL6A2-206ENST00000436769 GPRC5AQ8NFJ5 357 aa24.56■■□□□ 1.52
COL6A2-206ENST00000436769 HTATIP2Q9BUP3 242 aa24.56■■□□□ 1.52
COL6A2-206ENST00000436769 MAGEB6P1A0A0J9YX57 407 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 TCRBV5S4A2TA0A5A2 114 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 APBB1O00213 710 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 HMGCRP04035 888 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 PDE6AP16499 860 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 SHMT1P34896 483 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 TRIM32Q13049 653 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 SLC9C2Q5TAH2 1124 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 C12orf42Q96LP6 360 aa24.55■■□□□ 1.52
COL6A2-206ENST00000436769 GABPAQ06546 454 aa24.54■■□□□ 1.52
COL6A2-206ENST00000436769 CERKLQ49MI3 558 aaPredicted RBP24.54■■□□□ 1.52
COL6A2-206ENST00000436769 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.54■■□□□ 1.52
COL6A2-206ENST00000436769 GOLIM4O00461 696 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 HMMRO75330 724 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 EVX2Q03828 476 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 ACER1Q8TDN7 264 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 TRIB2Q92519 343 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 ZNF532Q9HCE3 1301 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 NAV1Q8NEY1 1877 aa24.53■■□□□ 1.52
COL6A2-206ENST00000436769 RAB11FIP3O75154 756 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 IFIT2P09913 472 aaKnown RBP24.52■■□□□ 1.52
COL6A2-206ENST00000436769 GUCY1A2P33402 732 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 ERVK-9P63128 1117 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 ERVK-24P63145 666 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 ABCB5Q2M3G0 1257 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 CHRDL2Q6WN34 429 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 USP6NLQ92738 828 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 EDC3Q96F86 508 aaKnown RBP24.52■■□□□ 1.52
COL6A2-206ENST00000436769 KIAA1683Q9H0B3 1180 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 PORCNQ9H237 461 aa24.52■■□□□ 1.52
COL6A2-206ENST00000436769 RPTORQ8N122 1335 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms