RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 Q3C1V9 767 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.52
HDAC8-213ENST00000436675 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 PORCNQ9H237 461 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 LRP2BPQ9P2M1 347 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 PI4KBQ9UBF8 816 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 RBPJLQ9UBG7 517 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 HERC5Q9UII4 1024 aaKnown RBP18.27■□□□□ 0.52
HDAC8-213ENST00000436675 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
HDAC8-213ENST00000436675 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
HDAC8-213ENST00000436675 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
HDAC8-213ENST00000436675 API5Q9BZZ5 524 aaKnown RBP18.26■□□□□ 0.51
HDAC8-213ENST00000436675 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
HDAC8-213ENST00000436675 FRMPD3Q5JV73 1810 aa18.26■□□□□ 0.51
HDAC8-213ENST00000436675 MYO5AQ9Y4I1 1855 aaKnown RBP18.25■□□□□ 0.51
HDAC8-213ENST00000436675 ASNSP08243 561 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 COL6A1P12109 1028 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
HDAC8-213ENST00000436675 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
HDAC8-213ENST00000436675 MCAMP43121 646 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
HDAC8-213ENST00000436675 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 FAM161BQ96MY7 647 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
HDAC8-213ENST00000436675 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
HDAC8-213ENST00000436675 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 MAPK4P31152 587 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 RGS2P41220 211 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 ERVK-24P63145 666 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 LHX8Q68G74 356 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 GPR142Q7Z601 462 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 COL25A1Q9BXS0 654 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-213ENST00000436675 DNAJC18Q9H819 358 aa18.24■□□□□ 0.51
HDAC8-213ENST00000436675 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
HDAC8-213ENST00000436675 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
HDAC8-213ENST00000436675 ARID4AP29374 1257 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-213ENST00000436675 NAA16Q6N069 864 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-213ENST00000436675 PLEKHH3Q7Z736 793 aa18.23■□□□□ 0.51
HDAC8-213ENST00000436675 TRMT44Q8IYL2 757 aaKnown RBP18.23■□□□□ 0.51
HDAC8-213ENST00000436675 USP6NLQ92738 828 aa18.23■□□□□ 0.51
HDAC8-213ENST00000436675 PALD1Q9ULE6 856 aa18.23■□□□□ 0.51
HDAC8-213ENST00000436675 FOCADQ5VW36 1801 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
HDAC8-213ENST00000436675 MORN1Q5T089 497 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 POTEEQ6S8J3 1075 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
HDAC8-213ENST00000436675 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
HDAC8-213ENST00000436675 EMILIN3Q9NT22 766 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 ZBTB21Q9ULJ3 1066 aa18.22■□□□□ 0.51
HDAC8-213ENST00000436675 BAG3O95817 575 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 GNAI3P08754 354 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 ATN1P54259 1190 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-213ENST00000436675 ADGRA1Q86SQ6 560 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC8-213ENST00000436675 GUCD1Q96NT3 240 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 APBA2Q99767 749 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-213ENST00000436675 FLT1P17948 1338 aa18.21■□□□□ 0.51
HDAC8-213ENST00000436675 MAST2Q6P0Q8 1798 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 MYH1P12882 1939 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 CNGA1P29973 690 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 G3BP1Q13283 466 aaKnown RBP eCLIP18.2■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
HDAC8-213ENST00000436675 FLRT1Q9NZU1 646 aa18.2■□□□□ 0.5
HDAC8-213ENST00000436675 PLCG2P16885 1265 aa18.19■□□□□ 0.5
HDAC8-213ENST00000436675 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
HDAC8-213ENST00000436675 MTX1Q13505 466 aa18.19■□□□□ 0.5
HDAC8-213ENST00000436675 TTC39AQ5SRH9 613 aa18.19■□□□□ 0.5
HDAC8-213ENST00000436675 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
HDAC8-213ENST00000436675 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-213ENST00000436675 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 CNMDO75829 334 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 GH2P01242 217 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 PPP4CP60510 307 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 DYNLL1P63167 89 aaKnown RBP18.18■□□□□ 0.5
HDAC8-213ENST00000436675 MFSD14CQ5VZR4 134 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 FEZ1Q99689 392 aa18.18■□□□□ 0.5
HDAC8-213ENST00000436675 EYSQ5T1H1 3165 aa18.17■□□□□ 0.5
HDAC8-213ENST00000436675 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
HDAC8-213ENST00000436675 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
HDAC8-213ENST00000436675 METTL16Q86W50 562 aaKnown RBP18.17■□□□□ 0.5
HDAC8-213ENST00000436675 TRMT2AQ8IZ69 625 aaKnown RBP18.17■□□□□ 0.5
HDAC8-213ENST00000436675 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
HDAC8-213ENST00000436675 TNNQ9UQP3 1299 aa18.17■□□□□ 0.5
HDAC8-213ENST00000436675 RABGAP1Q9Y3P9 1069 aa18.17■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
HDAC8-213ENST00000436675 GLRX3O76003 335 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms