RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 WDR18Q9BV38 432 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 EHD4Q9H223 541 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 SLC45A1Q9Y2W3 748 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 PTCH2Q9Y6C5 1203 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 MYH1P12882 1939 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 CTGFP29279 349 aa22.08■■□□□ 1.13
HMGN1-207ENST00000436324 PSMC4P43686 418 aa22.08■■□□□ 1.13
HMGN1-207ENST00000436324 RGS19P49795 217 aa22.08■■□□□ 1.13
HMGN1-207ENST00000436324 CERKLQ49MI3 558 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-207ENST00000436324 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.13
HMGN1-207ENST00000436324 TATDN1Q6P1N9 297 aa22.08■■□□□ 1.13
HMGN1-207ENST00000436324 ZBTB47Q9UFB7 747 aaPredicted RBP22.08■■□□□ 1.13
HMGN1-207ENST00000436324 FMNL1O95466 1100 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-207ENST00000436324 BCRP11274 1271 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 BACE1P56817 501 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-207ENST00000436324 SH3D19Q5HYK7 790 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 TRIM47Q96LD4 638 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 PUS7LQ9H0K6 701 aaKnown RBP22.07■■□□□ 1.12
HMGN1-207ENST00000436324 GINM1Q9NU53 330 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 TMOD4Q9NZQ9 345 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 ATAD5Q96QE3 1844 aa22.07■■□□□ 1.12
HMGN1-207ENST00000436324 SHMT1P34896 483 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 RAB3GAP1Q15042 981 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 ABCB5Q2M3G0 1257 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 KBTBD3Q8NAB2 608 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 SLC4A4Q9Y6R1 1079 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 ZSWIM8A7E2V4 1837 aa22.06■■□□□ 1.12
HMGN1-207ENST00000436324 USP17L10C9JJH3 530 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 DYNLL2Q96FJ2 89 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 CABP5Q9NP86 173 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 ATP8A2Q9NTI2 1148 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 PNMA3Q9UL41 463 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 TTC41PQ6P2S7 1318 aa22.05■■□□□ 1.12
HMGN1-207ENST00000436324 PTPRFP10586 1907 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 CYP2D7A0A087X1C5 515 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 ERC2O15083 957 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 OSBPP22059 807 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 GABPAQ06546 454 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 PABPC4Q13310 644 aaKnown RBP eCLIP22.04■■□□□ 1.128e-10■■□□□ 13.3
HMGN1-207ENST00000436324 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-207ENST00000436324 ZYXQ15942 572 aaKnown RBP22.04■■□□□ 1.12
HMGN1-207ENST00000436324 ANKRD13CQ8N6S4 541 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 SLC44A5Q8NCS7 719 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 PI4K2BQ8TCG2 481 aa22.04■■□□□ 1.12
HMGN1-207ENST00000436324 ASCC2Q9H1I8 757 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-207ENST00000436324 NAV1Q8NEY1 1877 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 C19orf81C9J6K1 198 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 SMIM22K7EJ46 135 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 MPHOSPH10O00566 681 aaKnown RBP22.03■■□□□ 1.12
HMGN1-207ENST00000436324 RNF113AO15541 343 aaKnown RBP22.03■■□□□ 1.12
HMGN1-207ENST00000436324 GNRH1P01148 92 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 MX1P20591 662 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 SLC9C1Q4G0N8 1177 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 GCC1Q96CN9 775 aa22.03■■□□□ 1.12
HMGN1-207ENST00000436324 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
HMGN1-207ENST00000436324 USP17L12C9JPN9 530 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 USP17L21D6R901 530 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 GLRX3O76003 335 aaKnown RBP22.02■■□□□ 1.12
HMGN1-207ENST00000436324 MYCP01106 439 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-207ENST00000436324 HOXD10P28358 340 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 FCGRTP55899 365 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 DDRGK1Q96HY6 314 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 FEZ1Q99689 392 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 SRRDQ9UH36 339 aa22.02■■□□□ 1.12
HMGN1-207ENST00000436324 IRX3P78415 501 aaPredicted RBP22.01■■□□□ 1.11
HMGN1-207ENST00000436324 SEPT2Q15019 361 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 USP17L2Q6R6M4 530 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 AMOTL1Q8IY63 956 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 ACER1Q8TDN7 264 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 SH3TC2Q8TF17 1288 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 APPBP2Q92624 585 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 ARMC5Q96C12 935 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 STRBPQ96SI9 672 aaKnown RBP22.01■■□□□ 1.11
HMGN1-207ENST00000436324 EMILIN3Q9NT22 766 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 MYPNQ86TC9 1320 aa22.01■■□□□ 1.11
HMGN1-207ENST00000436324 DDX60LQ5H9U9 1706 aaKnown RBP22■■□□□ 1.11
HMGN1-207ENST00000436324 GUCY1A2P33402 732 aa22■■□□□ 1.11
HMGN1-207ENST00000436324 C12orf60Q5U649 245 aa22■■□□□ 1.11
HMGN1-207ENST00000436324 NBPF11Q86T75 865 aa22■■□□□ 1.11
HMGN1-207ENST00000436324 RAET1EQ8TD07 263 aa22■■□□□ 1.11
HMGN1-207ENST00000436324 P2RX7Q99572 595 aaKnown RBP22■■□□□ 1.11
HMGN1-207ENST00000436324 FSD1Q9BTV5 496 aa22■■□□□ 1.11
HMGN1-207ENST00000436324 POTEFA5A3E0 1075 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 M0R2C6 588 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-207ENST00000436324 PRMT2P55345 433 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 PRKCZQ05513 592 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 AAMPQ13685 434 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 B4GALNT3Q6L9W6 998 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 CTR9Q6PD62 1173 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-207ENST00000436324 SWAP70Q9UH65 585 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 GABRQQ9UN88 632 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 LOC285556D6RIA3 1793 aa21.99■■□□□ 1.11
HMGN1-207ENST00000436324 TNPO2O14787 897 aaKnown RBP21.98■■□□□ 1.11
HMGN1-207ENST00000436324 GCLCP48506 637 aaPredicted RBP21.98■■□□□ 1.11
HMGN1-207ENST00000436324 ZNF333Q96JL9 665 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms