RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.66
CALD1-208ENST00000435928 FOXP4Q8IVH2 680 aaPredicted RBP19.2■□□□□ 0.66
CALD1-208ENST00000435928 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
CALD1-208ENST00000435928 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
CALD1-208ENST00000435928 GDF11O95390 407 aa19.19■□□□□ 0.66
CALD1-208ENST00000435928 HMGCRP04035 888 aa19.19■□□□□ 0.66
CALD1-208ENST00000435928 METTL16Q86W50 562 aaKnown RBP19.19■□□□□ 0.66
CALD1-208ENST00000435928 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.19■□□□□ 0.66
CALD1-208ENST00000435928 CCDC8Q9H0W5 538 aaPredicted RBP19.19■□□□□ 0.66
CALD1-208ENST00000435928 GINM1Q9NU53 330 aa19.19■□□□□ 0.66
CALD1-208ENST00000435928 MORF4L1Q9UBU8 362 aa19.19■□□□□ 0.66
CALD1-208ENST00000435928 SAP30BPQ9UHR5 308 aaKnown RBP19.19■□□□□ 0.66
CALD1-208ENST00000435928 ZBTB21Q9ULJ3 1066 aa19.19■□□□□ 0.66
CALD1-208ENST00000435928 NAV1Q8NEY1 1877 aa19.18■□□□□ 0.66
CALD1-208ENST00000435928 IDH1O75874 414 aaKnown RBP19.18■□□□□ 0.66
CALD1-208ENST00000435928 RLBP1P12271 317 aa19.18■□□□□ 0.66
CALD1-208ENST00000435928 CYP7A1P22680 504 aa19.18■□□□□ 0.66
CALD1-208ENST00000435928 DYNLL1P63167 89 aaKnown RBP19.18■□□□□ 0.66
CALD1-208ENST00000435928 JAG1P78504 1218 aa19.18■□□□□ 0.66
CALD1-208ENST00000435928 CRISPLD2Q9H0B8 497 aa19.18■□□□□ 0.66
CALD1-208ENST00000435928 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
CALD1-208ENST00000435928 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
CALD1-208ENST00000435928 C19orf81C9J6K1 198 aa19.17■□□□□ 0.66
CALD1-208ENST00000435928 USP17L10C9JJH3 530 aa19.17■□□□□ 0.66
CALD1-208ENST00000435928 ZBTB7BO15156 539 aaPredicted RBP19.17■□□□□ 0.66
CALD1-208ENST00000435928 HOXA7P31268 230 aaPredicted RBP19.17■□□□□ 0.66
CALD1-208ENST00000435928 SHROOM1Q2M3G4 852 aaPredicted RBP19.17■□□□□ 0.66
CALD1-208ENST00000435928 CERS3Q8IU89 383 aa19.17■□□□□ 0.66
CALD1-208ENST00000435928 EAF2Q96CJ1 260 aaPredicted RBP19.17■□□□□ 0.66
CALD1-208ENST00000435928 EVI5O60447 810 aa19.16■□□□□ 0.66
CALD1-208ENST00000435928 HERVK_113P62684 666 aa19.16■□□□□ 0.66
CALD1-208ENST00000435928 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
CALD1-208ENST00000435928 GJD2Q9UKL4 321 aa19.16■□□□□ 0.66
CALD1-208ENST00000435928 USP5P45974 858 aa19.15■□□□□ 0.66
CALD1-208ENST00000435928 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
CALD1-208ENST00000435928 MAGEB6Q8N7X4 407 aa19.15■□□□□ 0.66
CALD1-208ENST00000435928 GPRC5AQ8NFJ5 357 aa19.15■□□□□ 0.66
CALD1-208ENST00000435928 PAWRQ96IZ0 340 aaKnown RBP19.15■□□□□ 0.66
CALD1-208ENST00000435928 P2RX7Q99572 595 aaKnown RBP19.15■□□□□ 0.66
CALD1-208ENST00000435928 NECAB2Q7Z6G3 386 aa19.14■□□□□ 0.65
CALD1-208ENST00000435928 ERC1Q8IUD2 1116 aa19.14■□□□□ 0.65
CALD1-208ENST00000435928 SOCS4Q8WXH5 440 aa19.14■□□□□ 0.65
CALD1-208ENST00000435928 HMX1Q9NP08 348 aaPredicted RBP19.14■□□□□ 0.65
CALD1-208ENST00000435928 NDUFB9Q9Y6M9 179 aa19.14■□□□□ 0.65
CALD1-208ENST00000435928 RPTORQ8N122 1335 aa19.14■□□□□ 0.65
CALD1-208ENST00000435928 GH2P01242 217 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 MAP3K12Q12852 859 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 TRIM32Q13049 653 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 PDE3AQ14432 1141 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 USP17L2Q6R6M4 530 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 AACSQ86V21 672 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
CALD1-208ENST00000435928 ANKLE1Q8NAG6 615 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 DIS3LQ8TF46 1054 aaKnown RBP19.13■□□□□ 0.65
CALD1-208ENST00000435928 GTF3C2Q8WUA4 911 aaPredicted RBP19.13■□□□□ 0.65
CALD1-208ENST00000435928 TRIB2Q92519 343 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 FEZ1Q99689 392 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 PRO3102Q9H379 93 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 TXNRD2Q9NNW7 524 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 SERPINB13Q9UIV8 391 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 EXOC6BQ9Y2D4 811 aa19.13■□□□□ 0.65
CALD1-208ENST00000435928 MYH8P13535 1937 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 PEX10O60683 326 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 CYP2B6P20813 491 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 MAPK4P31152 587 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 ERVK-9P63128 1117 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 ERVK-24P63145 666 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 TMED8Q6PL24 325 aaPredicted RBP19.12■□□□□ 0.65
CALD1-208ENST00000435928 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 EHD4Q9H223 541 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 LAMA3Q16787 3333 aa19.12■□□□□ 0.65
CALD1-208ENST00000435928 FRMPD3Q5JV73 1810 aa19.11■□□□□ 0.65
CALD1-208ENST00000435928 EMILIN3Q9NT22 766 aa19.11■□□□□ 0.65
CALD1-208ENST00000435928 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
CALD1-208ENST00000435928 XRCC5P13010 732 aaKnown RBP19.1■□□□□ 0.65
CALD1-208ENST00000435928 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
CALD1-208ENST00000435928 RAB3GAP1Q15042 981 aa19.1■□□□□ 0.65
CALD1-208ENST00000435928 ZYXQ15942 572 aaKnown RBP19.1■□□□□ 0.65
CALD1-208ENST00000435928 HSP90AB4PQ58FF6 505 aa19.1■□□□□ 0.65
CALD1-208ENST00000435928 TATDN1Q6P1N9 297 aa19.1■□□□□ 0.65
CALD1-208ENST00000435928 TTC6Q86TZ1 520 aa19.1■□□□□ 0.65
CALD1-208ENST00000435928 TRMT44Q8IYL2 757 aaKnown RBP19.1■□□□□ 0.65
CALD1-208ENST00000435928 ZKSCAN1P17029 563 aaPredicted RBP19.09■□□□□ 0.65
CALD1-208ENST00000435928 USP14P54578 494 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 CERKLQ49MI3 558 aaPredicted RBP19.09■□□□□ 0.65
CALD1-208ENST00000435928 MAP3K21Q5TCX8 1036 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 GPR142Q7Z601 462 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 PANK1Q8TE04 598 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 C12orf42Q96LP6 360 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 NBPF3Q9H094 633 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 PORCNQ9H237 461 aa19.09■□□□□ 0.65
CALD1-208ENST00000435928 CWC22Q9HCG8 908 aaKnown RBP19.09■□□□□ 0.65
CALD1-208ENST00000435928 A0A1W2PPC1 479 aa19.08■□□□□ 0.64
CALD1-208ENST00000435928 RGS2P41220 211 aa19.08■□□□□ 0.64
CALD1-208ENST00000435928 TTF1Q15361 905 aaPredicted RBP19.08■□□□□ 0.64
CALD1-208ENST00000435928 ABCB5Q2M3G0 1257 aa19.08■□□□□ 0.64
CALD1-208ENST00000435928 Q3C1V9 767 aa19.08■□□□□ 0.64
CALD1-208ENST00000435928 PLEKHH3Q7Z736 793 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms