RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 GRM8O00222 908 aa13.02□□□□□ -0.33
CPNE1-214ENST00000435747 ARRDC4Q8NCT1 418 aa13.02□□□□□ -0.33
CPNE1-214ENST00000435747 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
CPNE1-214ENST00000435747 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.33
CPNE1-214ENST00000435747 PEX10O60683 326 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 RGS3P49796 1198 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 KCNQ1P51787 676 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 TFF2Q03403 129 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 FPGSQ05932 587 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 SNX17Q15036 470 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 DIXDC1Q155Q3 683 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 MORN1Q5T089 497 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 PLEKHH3Q7Z736 793 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 ZNF280CQ8ND82 737 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
CPNE1-214ENST00000435747 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
CPNE1-214ENST00000435747 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 ENTPD3O75355 529 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
CPNE1-214ENST00000435747 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
CPNE1-214ENST00000435747 SLURP2P0DP57 97 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 RAG1P15918 1043 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 ITGB8P26012 769 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 MAP3K10Q02779 954 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 MAP2K5Q13163 448 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 PBX4Q9BYU1 374 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
CPNE1-214ENST00000435747 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 C11orf16Q9NQ32 467 aa13□□□□□ -0.33
CPNE1-214ENST00000435747 PTPRCP08575 1304 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 CLTBP09497 229 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 PBX2P40425 430 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 TLE2Q04725 743 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-214ENST00000435747 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 WDR66Q8TBY9 1149 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
CPNE1-214ENST00000435747 SRCIN1Q9C0H9 1055 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 PORCNQ9H237 461 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 FLRT1Q9NZU1 646 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
CPNE1-214ENST00000435747 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 DDTLA6NHG4 134 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-214ENST00000435747 HERVK_113P62684 666 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 ERVK-24P63145 666 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 ATP2B2Q01814 1243 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
CPNE1-214ENST00000435747 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 IDI2Q9BXS1 227 aa12.98□□□□□ -0.33
CPNE1-214ENST00000435747 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 TRANK1O15050 2925 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 KIAA0355O15063 1070 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
CPNE1-214ENST00000435747 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 Q3C1V9 767 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-214ENST00000435747 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 RBPJLQ9UBG7 517 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 SPTBN4Q9H254 2564 aa12.97□□□□□ -0.33
CPNE1-214ENST00000435747 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 GRXCR1A8MXD5 290 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-214ENST00000435747 CYP2C19P33261 490 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 NHLH1Q02575 133 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 TRPV1Q8NER1 839 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-214ENST00000435747 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.339e-8■■■■■ 116.8
CPNE1-214ENST00000435747 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-214ENST00000435747 MSRAQ9UJ68 235 aa12.96□□□□□ -0.33
CPNE1-214ENST00000435747 GBF1Q92538 1859 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 USP17L5A8MUK1 530 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 ERC2O15083 957 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
CPNE1-214ENST00000435747 PRDX5P30044 214 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 PICALMQ13492 652 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 RAB30Q15771 203 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
CPNE1-214ENST00000435747 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.348e-8■■■□□ 15.7
CPNE1-214ENST00000435747 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.95□□□□□ -0.344e-21■■■■□ 22.1
CPNE1-214ENST00000435747 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
CPNE1-214ENST00000435747 TMEM39AQ9NV64 488 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms