RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 FAM76AQ8TAV0 307 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TSC22D3Q99576 134 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CORO1CQ9ULV4 474 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 MED1Q15648 1581 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 HMGB1P1B2RPK0 211 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 FOXO3O43524 673 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 ZEB2O60315 1214 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 RNF8O76064 485 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 IBSPP21815 317 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CA8P35219 290 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 GSDMDP57764 484 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 NECAB1Q8N987 351 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC47Q96A33 483 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 EVI5LQ96CN4 794 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 MPHOSPH6Q99547 160 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CENPHQ9H3R5 247 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 DDX20Q9UHI6 824 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CHMP3Q9Y3E7 222 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 RBM8AQ9Y5S9 174 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 METP08581 1390 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 ZSCAN12O43309 604 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TIMM44O43615 452 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TPPPO94811 219 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 CCT5P48643 541 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 PLCB4Q15147 1175 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TTLL7Q6ZT98 887 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 FERMT3Q86UX7 667 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TRIML1Q8N9V2 468 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 AFAP1L1Q8TED9 768 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 YIPF3Q9GZM5 350 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 IRF2BPLQ9H1B7 796 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 RETREG1Q9H6L5 497 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 ECHDC1Q9NTX5 307 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TRMT1Q9NXH9 659 aaKnown RBP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 TBC1D7Q9P0N9 293 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.25□□□□□ -1.09
GARNL3-205ENST00000435213 NWD1Q149M9 1564 aa8.25□□□□□ -1.09
GARNL3-205ENST00000435213 JCADQ9P266 1359 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 POTEB2H3BUK9 544 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 NR1I2O75469 434 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 CCZ1BP86790 482 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 CCZ1P86791 482 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-205ENST00000435213 DYNC1I2Q13409 638 aaKnown RBP8.24□□□□□ -1.09
GARNL3-205ENST00000435213 MAP4K1Q92918 833 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 XAGE2Q96GT9 111 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 PTPRUQ92729 1446 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 GOLGA6L7A0A1B0GV03 622 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 MYO1FO00160 1098 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 FNTAP49354 379 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 ACTN3Q08043 901 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-205ENST00000435213 MTX1Q13505 466 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 MIS18BP1Q6P0N0 1132 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 BLOC1S2Q6QNY1 142 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 DZIP1Q86YF9 867 aaKnown RBP8.24□□□□□ -1.09
GARNL3-205ENST00000435213 RABGGTAQ92696 567 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 PGBD1Q96JS3 809 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 SPAG5Q96R06 1193 aa8.24□□□□□ -1.09
GARNL3-205ENST00000435213 NPHP4O75161 1426 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC69A6NI79 296 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ZFXP17010 805 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 KCNJ6P48051 423 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 SCNN1BP51168 640 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 OLFML1Q6UWY5 402 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 CLASRPQ8N2M8 674 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 WHAMMQ8TF30 809 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 NAT10Q9H0A0 1025 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PLEKHA4Q9H4M7 779 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 IMPACTQ9P2X3 320 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ITGB1BP2Q9UKP3 347 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 CFAP45Q9UL16 551 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 USP27XA6NNY8 438 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 M0R2C6 588 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 LIN7AO14910 233 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 SLC27A2O14975 620 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 RPS6KB1P23443 525 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ADCY1Q08828 1119 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 RESTQ13127 1097 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 OTUD6AQ7L8S5 288 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 APLFQ8IW19 511 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 KIRREL3Q8IZU9 778 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ZNHIT6Q9NWK9 470 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 HMG20BQ9P0W2 317 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 HOOK1Q9UJC3 728 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ADCY9O60503 1353 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PPFIA3O75145 1194 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PSMD7P51665 324 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 IFFO1Q0D2I5 559 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 KRT72Q14CN4 511 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 SKIDA1Q1XH10 827 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 FAM173BQ6P4H8 233 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms