RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 DCP1AQ9NPI6 582 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC4-202ENST00000434101 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
TRAPPC4-202ENST00000434101 ZBTB21Q9ULJ3 1066 aa15.91■□□□□ 0.14
TRAPPC4-202ENST00000434101 GDF11O95390 407 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 TATDN1Q6P1N9 297 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 EXOC6Q8TAG9 804 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 PNMA3Q9UL41 463 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 AGTPBP1Q9UPW5 1226 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 HPS5Q9UPZ3 1129 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 MGAMO43451 1857 aa15.9■□□□□ 0.14
TRAPPC4-202ENST00000434101 C19orf81C9J6K1 198 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 PLCD1P51178 756 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 HMGCS2P54868 508 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.138e-8■■■■□ 23
TRAPPC4-202ENST00000434101 SLFNL1Q499Z3 407 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 C17orf99Q6UX52 265 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 OTUD7AQ8TE49 926 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 APPBP2Q92624 585 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 CABP5Q9NP86 173 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 TMOD4Q9NZQ9 345 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 CPA4Q9UI42 421 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 ADGRA2Q96PE1 1338 aa15.89■□□□□ 0.13
TRAPPC4-202ENST00000434101 PRKAB2O43741 272 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 GNRH1P01148 92 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 GH2P01242 217 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 BACE1P56817 501 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 SH3D19Q5HYK7 790 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 PUS7LQ9H0K6 701 aaKnown RBP15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 SLC4A4Q9Y6R1 1079 aa15.88■□□□□ 0.13
TRAPPC4-202ENST00000434101 USP17L10C9JJH3 530 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 CHGBP05060 677 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 CYP2C8P10632 490 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 SHMT1P34896 483 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 GABPAQ06546 454 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 MTMR2Q13614 643 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 SMC5Q8IY18 1101 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 PTPN22Q9Y2R2 807 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 KIAA0100Q14667 2235 aaKnown RBP15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 ZSWIM8A7E2V4 1837 aa15.87■□□□□ 0.13
TRAPPC4-202ENST00000434101 OSBPP22059 807 aa15.86■□□□□ 0.13
TRAPPC4-202ENST00000434101 JAG1P78504 1218 aa15.86■□□□□ 0.13
TRAPPC4-202ENST00000434101 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
TRAPPC4-202ENST00000434101 STRBPQ96SI9 672 aaKnown RBP15.86■□□□□ 0.13
TRAPPC4-202ENST00000434101 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
TRAPPC4-202ENST00000434101 DOCK3Q8IZD9 2030 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 CYP2D6P10635 497 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 BCRP11274 1271 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 GNAT2P19087 354 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 HOXD10P28358 340 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 PDE1AP54750 535 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 PRMT2P55345 433 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 SHROOM1Q2M3G4 852 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 C12orf60Q5U649 245 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 USP17L2Q6R6M4 530 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 OSBP2Q969R2 916 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 FEZ1Q99689 392 aa15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC4-202ENST00000434101 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 USP17L21D6R901 530 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 GPAA1O43292 621 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 PSMC4P43686 418 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 USP14P54578 494 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 CAP1Q01518 475 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 EVI5LQ96CN4 794 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 ARHGAP39Q9C0H5 1083 aa15.84■□□□□ 0.13
TRAPPC4-202ENST00000434101 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 FMNL1O95466 1100 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 IGHDP01880 384 aa15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 HOXA7P31268 230 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 FCGRTP55899 365 aa15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 CHD1LQ86WJ1 897 aa15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 CCDC17Q96LX7 622 aa15.83■□□□□ 0.12
TRAPPC4-202ENST00000434101 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 CDK8P49336 464 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 EVX2Q03828 476 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 SBK1Q52WX2 424 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 TMEM179Q6ZVK1 233 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 SLC44A5Q8NCS7 719 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 DYNLL2Q96FJ2 89 aa15.82■□□□□ 0.12
TRAPPC4-202ENST00000434101 KIAA1683Q9H0B3 1180 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms