RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 SHISA5Q8N114 240 aa5.71□□□□□ -1.5
LINC01239-201ENST00000433645 TOP6BLQ8N6T0 577 aa5.71□□□□□ -1.5
LINC01239-201ENST00000433645 TMEM87BQ96K49 555 aa5.71□□□□□ -1.5
LINC01239-201ENST00000433645 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
LINC01239-201ENST00000433645 MAPK8IP1Q9UQF2 711 aa5.71□□□□□ -1.5
LINC01239-201ENST00000433645 POLR3KQ9Y2Y1 108 aaPredicted RBP5.71□□□□□ -1.5
LINC01239-201ENST00000433645 HYAL3O43820 417 aaPredicted RBP5.7□□□□□ -1.5
LINC01239-201ENST00000433645 PLCG1P19174 1290 aa5.7□□□□□ -1.5
LINC01239-201ENST00000433645 ZNF165P49910 485 aa5.7□□□□□ -1.5
LINC01239-201ENST00000433645 YARSP54577 528 aaKnown RBP5.7□□□□□ -1.5
LINC01239-201ENST00000433645 HDLBPQ00341 1268 aaKnown RBP5.7□□□□□ -1.5
LINC01239-201ENST00000433645 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
LINC01239-201ENST00000433645 COL9A2Q14055 689 aaPredicted RBP5.7□□□□□ -1.5
LINC01239-201ENST00000433645 ACSF2Q96CM8 615 aaPredicted RBP5.7□□□□□ -1.5
LINC01239-201ENST00000433645 MISP3Q96FF7 219 aa5.7□□□□□ -1.5
LINC01239-201ENST00000433645 ZFP64Q9NPA5 681 aa5.7□□□□□ -1.5
LINC01239-201ENST00000433645 LEFTY1O75610 366 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 SLITRK5O94991 958 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 HTR3BO95264 441 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 EOMESO95936 686 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 CRKP46108 304 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 RACK1P63244 317 aaKnown RBP5.69□□□□□ -1.5
LINC01239-201ENST00000433645 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
LINC01239-201ENST00000433645 ZNF394Q53GI3 561 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 PRAMEF13Q5VWM6 474 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 NKD1Q969G9 470 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 EAF1Q96JC9 268 aaPredicted RBP5.69□□□□□ -1.5
LINC01239-201ENST00000433645 TGIF2Q9GZN2 237 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 BSDC1Q9NW68 430 aaPredicted RBP5.69□□□□□ -1.5
LINC01239-201ENST00000433645 REV1Q9UBZ9 1251 aa5.69□□□□□ -1.5
LINC01239-201ENST00000433645 SCO2A0A1W2PP80 73 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 MED26O95402 600 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 IMPDH2P12268 514 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 CYP7A1P22680 504 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 HOXA10P31260 410 aaPredicted RBP5.68□□□□□ -1.5
LINC01239-201ENST00000433645 ETV3P41162 512 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 OXCT1P55809 520 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 LETMD1Q6P1Q0 360 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 STK11IPQ8N1F8 1099 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 Q8N3U1 123 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 FBXO27Q8NI29 283 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 RASGRP4Q8TDF6 673 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 CYB5D2Q8WUJ1 264 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 HEXIM2Q96MH2 286 aaKnown RBP5.68□□□□□ -1.5
LINC01239-201ENST00000433645 TNKS2Q9H2K2 1166 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 BRMS1Q9HCU9 246 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 PRDM5Q9NQX1 630 aaPredicted RBP5.68□□□□□ -1.5
LINC01239-201ENST00000433645 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 UBP1Q9NZI7 540 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 CORINQ9Y5Q5 1042 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 SNX11Q9Y5W9 270 aa5.68□□□□□ -1.5
LINC01239-201ENST00000433645 ZNF865P0CJ78 1059 aaPredicted RBP5.67□□□□□ -1.5
LINC01239-201ENST00000433645 TCF3P15923 654 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 SSTR4P31391 388 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 KIR3DL1P43629 444 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 GJA8P48165 433 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 VSIG10LQ86VR7 867 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 NETO1Q8TDF5 533 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 MIPEPQ99797 713 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 GMIPQ9P107 970 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 ZC3H7BQ9UGR2 993 aaKnown RBP5.67□□□□□ -1.5
LINC01239-201ENST00000433645 CEP131Q9UPN4 1083 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.67□□□□□ -1.5
LINC01239-201ENST00000433645 PCDHB14Q9Y5E9 798 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 PCDHGB7Q9Y5F8 929 aa5.67□□□□□ -1.5
LINC01239-201ENST00000433645 TMEM265A0A087WTH1 108 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 MEIS3P2A8K0S8 358 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 E9PSI1 815 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
LINC01239-201ENST00000433645 CEACAM5P06731 702 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 CCNFP41002 786 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 IFI16Q16666 785 aaKnown RBP5.66□□□□□ -1.5
LINC01239-201ENST00000433645 SEZ6Q53EL9 994 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 SFRP5Q5T4F7 317 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 CDCP2Q5VXM1 449 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 DNAJB8Q8NHS0 232 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 LRRC4CQ9HCJ2 640 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
LINC01239-201ENST00000433645 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 SLC22A31A6NKX4 558 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 GRIN3BO60391 1043 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 WNT11O96014 354 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 RBM25P49756 843 aaKnown RBP5.65□□□□□ -1.5
LINC01239-201ENST00000433645 CLCN7P51798 805 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 PRKCQQ04759 706 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 RAD51AP2Q09MP3 1159 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 ARHGAP27Q6ZUM4 889 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 RBBP8NLQ8NC74 664 aaPredicted RBP5.65□□□□□ -1.5
LINC01239-201ENST00000433645 PIWIL2Q8TC59 973 aaKnown RBP5.65□□□□□ -1.5
LINC01239-201ENST00000433645 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 CCDC74BQ96LY2 380 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 IGSF5Q9NSI5 407 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 ZNRF3Q9ULT6 936 aa5.65□□□□□ -1.5
LINC01239-201ENST00000433645 TPX2Q9ULW0 747 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms