RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 RFX7Q2KHR2 1363 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 ZMYM6O95789 1325 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 HNRNPH1P31943 449 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 INPP5BP32019 993 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 NR5A1Q13285 461 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 ATG9AQ7Z3C6 839 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
HMGCS1-202ENST00000433297 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 GPAA1O43292 621 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 IRAK1P51617 712 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 USP14P54578 494 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 GNGT1P63211 74 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 APOA5Q6Q788 366 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 TMTC1Q8IUR5 882 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CSRNP2Q9H175 543 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CXorf56Q9H5V9 222 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 GOLGA6BA6NDN3 693 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 FOXP2O15409 715 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 A1BGP04217 495 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ATP1A1P05023 1023 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 TUBBP07437 444 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ADORA1P30542 326 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CTNND2Q9UQB3 1225 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 MYBL2P10244 700 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ZAP70P43403 619 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CYP26C1Q6V0L0 522 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CABP5Q9NP86 173 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ABHD10Q9NUJ1 306 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 SAR1BQ9Y6B6 198 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 CAPN7Q9Y6W3 813 aa13.05□□□□□ -0.32
HMGCS1-202ENST00000433297 ZNF185O15231 689 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 CCDC122Q5T0U0 273 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 SUGP1Q8IWZ8 645 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 TMEM2Q9UHN6 1383 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 SCARF1Q14162 830 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 ZEB2O60315 1214 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.326e-7■■■■□ 19.7
HMGCS1-202ENST00000433297 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 JPH2Q9BR39 696 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
HMGCS1-202ENST00000433297 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 PTPREP23469 700 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 SETQ01105 290 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 APTXQ7Z2E3 356 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 EPN1Q9Y6I3 576 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 MCM3P25205 808 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 C2orf54Q08AI8 447 aa13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 TSR1Q2NL82 804 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-202ENST00000433297 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms