RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PRKCQQ04759 706 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 FAM160A1Q05DH4 1040 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 MRPL58Q14197 206 aaKnown RBP5.88□□□□□ -1.47
CLK1-204ENST00000432425 PRAMEF13Q5VWM6 474 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 MCTP1Q6DN14 999 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 FAM214BQ7L5A3 538 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 GATAD2BQ8WXI9 593 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 RHOVQ96L33 236 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 PAK6Q9NQU5 681 aaPredicted RBP5.88□□□□□ -1.47
CLK1-204ENST00000432425 ADAM30Q9UKF2 790 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 VAV3Q9UKW4 847 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 MAPK8IP1Q9UQF2 711 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 CILPO75339 1184 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 SLITRK5O94991 958 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 F13A1P00488 732 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 ZNF16P17020 682 aaPredicted RBP5.88□□□□□ -1.47
CLK1-204ENST00000432425 BNIP3Q12983 259 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
CLK1-204ENST00000432425 LETMD1Q6P1Q0 360 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 ZNF574Q6ZN55 896 aaPredicted RBP5.88□□□□□ -1.47
CLK1-204ENST00000432425 NFXL1Q6ZNB6 911 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 XAGE3Q8WTP9 111 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 KBTBD4Q9NVX7 518 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 TJP2Q9UDY2 1190 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 PLAGL2Q9UPG8 496 aa5.88□□□□□ -1.47
CLK1-204ENST00000432425 PLCG1P19174 1290 aa5.87□□□□□ -1.47
CLK1-204ENST00000432425 AOC3Q16853 763 aa5.87□□□□□ -1.47
CLK1-204ENST00000432425 SLC6A19Q695T7 634 aa5.87□□□□□ -1.47
CLK1-204ENST00000432425 HS2ST1Q7LGA3 356 aa5.87□□□□□ -1.47
CLK1-204ENST00000432425 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
CLK1-204ENST00000432425 SNX11Q9Y5W9 270 aa5.87□□□□□ -1.47
CLK1-204ENST00000432425 FAM221AA4D161 298 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 CYP7A1P22680 504 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 PLCL1Q15111 1095 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 SFRP5Q5T4F7 317 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 ERMP1Q7Z2K6 904 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 SPRED2Q7Z698 418 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 GOLM1Q8NBJ4 401 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 DPH2Q9BQC3 489 aaPredicted RBP5.86□□□□□ -1.47
CLK1-204ENST00000432425 TNKS2Q9H2K2 1166 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 ADGRE2Q9UHX3 823 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 GGT7Q9UJ14 662 aa5.86□□□□□ -1.47
CLK1-204ENST00000432425 COL17A1Q9UMD9 1497 aaPredicted RBP5.86□□□□□ -1.47
CLK1-204ENST00000432425 FAM155AB1AL88 458 aaPredicted RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 MCATQ8IVS2 390 aaKnown RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 TMEM87AQ8NBN3 555 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 ACSF2Q96CM8 615 aaPredicted RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 COPRSQ9NQ92 184 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 CD8BP10966 210 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 CLCN7P51798 805 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 MPP2Q14168 576 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 ANGEL2Q5VTE6 544 aaKnown RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 SPACA3Q8IXA5 215 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 MFSD4AQ8N468 514 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 FAM13CQ8NE31 585 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 ASB11Q8WXH4 323 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 COX4I2Q96KJ9 171 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 SUPT16HQ9Y5B9 1047 aaKnown RBP5.85□□□□□ -1.47
CLK1-204ENST00000432425 CORINQ9Y5Q5 1042 aa5.85□□□□□ -1.47
CLK1-204ENST00000432425 CBX7O95931 251 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 EIF4A3P38919 411 aaKnown RBP5.84□□□□□ -1.47
CLK1-204ENST00000432425 CD96P40200 585 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 ETV3P41162 512 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 NKPD1Q17RQ9 610 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 FAM196AQ6ZSG2 479 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 CDH24Q86UP0 819 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 WFDC3Q8IUB2 231 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
CLK1-204ENST00000432425 TLR3O15455 904 aaKnown RBP5.83□□□□□ -1.48
CLK1-204ENST00000432425 GRIN3BO60391 1043 aa5.83□□□□□ -1.48
CLK1-204ENST00000432425 FUT4P22083 530 aa5.83□□□□□ -1.48
CLK1-204ENST00000432425 GARTP22102 1010 aa5.83□□□□□ -1.48
CLK1-204ENST00000432425 CWF19L2Q2TBE0 894 aaKnown RBP5.83□□□□□ -1.48
CLK1-204ENST00000432425 REC114Q7Z4M0 266 aa5.83□□□□□ -1.48
CLK1-204ENST00000432425 REV1Q9UBZ9 1251 aa5.83□□□□□ -1.48
CLK1-204ENST00000432425 PRR33A8MZF0 331 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 PAX4O43316 350 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 ZNF865P0CJ78 1059 aaPredicted RBP5.82□□□□□ -1.48
CLK1-204ENST00000432425 KIR3DL1P43629 444 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 TRIM26Q12899 539 aaPredicted RBP5.82□□□□□ -1.48
CLK1-204ENST00000432425 IKZF1Q13422 519 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 MLECQ14165 292 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 TMEM201Q5SNT2 666 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 CDKAL1Q5VV42 579 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 FBXL19Q6PCT2 694 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 CBLL1Q75N03 491 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 FBXO27Q8NI29 283 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 PI4K2BQ8TCG2 481 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 CYB5D2Q8WUJ1 264 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 ROBO2Q9HCK4 1378 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 KLHL3Q9UH77 587 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 CAPN6Q9Y6Q1 641 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 PITPNM2Q9BZ72 1349 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 CNTNAP4Q9C0A0 1308 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 PRR36Q9H6K5 1346 aa5.82□□□□□ -1.48
CLK1-204ENST00000432425 RBM47A0AV96 593 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms