RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TNMDQ9H2S6 317 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 GOLPH3LQ9H4A5 285 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 POLR3EQ9NVU0 708 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
VRK2-205ENST00000432057 GAKO14976 1311 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 DEXIO95424 95 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
VRK2-205ENST00000432057 SLC15A2Q16348 729 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
VRK2-205ENST00000432057 YEATS4O95619 227 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 TROAPQ12815 778 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 CERS3Q8IU89 383 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 AMOTL1Q8IY63 956 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 PCDHA7Q9UN72 937 aa22.68■■□□□ 1.22
VRK2-205ENST00000432057 DDAH1O94760 285 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 PLEKHA8P1O95397 391 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 PPP2R5BQ15173 497 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 SLF2Q8IX21 1173 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
VRK2-205ENST00000432057 SCN9AQ15858 1988 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 CALM1P0DP23 149 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 CALM2P0DP24 149 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 CALM3P0DP25 149 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 RHBDL3P58872 404 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 ANO1Q5XXA6 986 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 CKAP2LQ8IYA6 745 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 FAM163AQ96GL9 167 aaPredicted RBP22.66■■□□□ 1.22
VRK2-205ENST00000432057 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
VRK2-205ENST00000432057 KCNJ14Q9UNX9 436 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 FLT1P17948 1338 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 MMP1P03956 469 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 PLCG2P16885 1265 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 U2AF2P26368 475 aaKnown RBP eCLIP22.66■■□□□ 1.223e-7■■■■□ 20.2
VRK2-205ENST00000432057 PLCD1P51178 756 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 TFAP4Q01664 338 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 FSIP1Q8NA03 581 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 SLC44A5Q8NCS7 719 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 KCNG4Q8TDN1 519 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 RNF26Q9BY78 433 aaPredicted RBP22.66■■□□□ 1.22
VRK2-205ENST00000432057 RBM28Q9NW13 759 aaKnown RBP22.66■■□□□ 1.22
VRK2-205ENST00000432057 STK32BQ9NY57 414 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 BAZ2BQ9UIF8 2168 aaKnown RBP22.66■■□□□ 1.22
VRK2-205ENST00000432057 DAGLAQ9Y4D2 1042 aa22.66■■□□□ 1.22
VRK2-205ENST00000432057 SPTLC2O15270 562 aa22.65■■□□□ 1.22
VRK2-205ENST00000432057 FUT2Q10981 343 aa22.65■■□□□ 1.22
VRK2-205ENST00000432057 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
VRK2-205ENST00000432057 RCSD1Q6JBY9 416 aa22.65■■□□□ 1.22
VRK2-205ENST00000432057 CCDC73Q6ZRK6 1079 aa22.65■■□□□ 1.22
VRK2-205ENST00000432057 RBM43Q6ZSC3 357 aaKnown RBP22.65■■□□□ 1.22
VRK2-205ENST00000432057 CERS5Q8N5B7 392 aa22.65■■□□□ 1.22
VRK2-205ENST00000432057 TMX4Q9H1E5 349 aaPredicted RBP22.65■■□□□ 1.22
VRK2-205ENST00000432057 MXD3Q9BW11 206 aa22.64■■□□□ 1.22
VRK2-205ENST00000432057 MKNK2Q9HBH9 465 aa22.64■■□□□ 1.22
VRK2-205ENST00000432057 SNED1Q8TER0 1413 aa22.64■■□□□ 1.21
VRK2-205ENST00000432057 F8W031 263 aaPredicted RBP22.64■■□□□ 1.21
VRK2-205ENST00000432057 H0YIN7 160 aa22.64■■□□□ 1.21
VRK2-205ENST00000432057 CCDC192P0DO97 292 aa22.64■■□□□ 1.21
VRK2-205ENST00000432057 TMTC3Q6ZXV5 915 aa22.64■■□□□ 1.21
VRK2-205ENST00000432057 SF3B2Q13435 895 aaKnown RBP22.63■■□□□ 1.21
VRK2-205ENST00000432057 ADALQ6DHV7 355 aa22.63■■□□□ 1.21
VRK2-205ENST00000432057 STYK1Q6J9G0 422 aa22.63■■□□□ 1.21
VRK2-205ENST00000432057 DIS3L2Q8IYB7 885 aaKnown RBP22.63■■□□□ 1.21
VRK2-205ENST00000432057 MRPS27Q92552 414 aaKnown RBP22.63■■□□□ 1.21
VRK2-205ENST00000432057 PDLIM2Q96JY6 352 aa22.63■■□□□ 1.21
VRK2-205ENST00000432057 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
VRK2-205ENST00000432057 IL17RBQ9NRM6 502 aa22.63■■□□□ 1.21
VRK2-205ENST00000432057 CNTNAP5Q8WYK1 1306 aa22.63■■□□□ 1.21
VRK2-205ENST00000432057 hCG_1642624A0A1W2PR95 340 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 BTBD18B2RXH4 712 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 CHRNA5P30532 468 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 AKAP17AQ02040 695 aaKnown RBP22.62■■□□□ 1.21
VRK2-205ENST00000432057 FAM160A1Q05DH4 1040 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 TYRO3Q06418 890 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 SNW1Q13573 536 aaKnown RBP22.62■■□□□ 1.21
VRK2-205ENST00000432057 SAFBQ15424 915 aaKnown RBP eCLIP22.62■■□□□ 1.21
VRK2-205ENST00000432057 ENGASEQ8NFI3 743 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 CTCFLQ8NI51 663 aaPredicted RBP22.62■■□□□ 1.21
VRK2-205ENST00000432057 SHISA4Q96DD7 197 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 EYA3Q99504 573 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 A0A1W2PQ27 194 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 A0A1W2PQ64 194 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 A0A1W2PQD8 194 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 PKN1Q16512 942 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 NOSTRINQ8IVI9 506 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 ZNF219Q9P2Y4 722 aaPredicted RBP22.62■■□□□ 1.21
VRK2-205ENST00000432057 SUGT1Q9Y2Z0 365 aa22.62■■□□□ 1.21
VRK2-205ENST00000432057 USP17L3A6NCW0 530 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 USP17L4A6NCW7 530 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 G3V3G9 751 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 PRPF3O43395 683 aaKnown RBP22.61■■□□□ 1.21
VRK2-205ENST00000432057 RASA1P20936 1047 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 NT5C2P49902 561 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 DCAF8Q5TAQ9 597 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 USP17L1Q7RTZ2 530 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 TRIM44Q96DX7 344 aaPredicted RBP22.61■■□□□ 1.21
VRK2-205ENST00000432057 KAT14Q9H8E8 782 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 TTF2Q9UNY4 1162 aaKnown RBP22.61■■□□□ 1.21
VRK2-205ENST00000432057 MRVI1Q9Y6F6 885 aa22.61■■□□□ 1.21
VRK2-205ENST00000432057 TSPY3P0CV98 308 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms