RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 GJA5P36382 358 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 CDK8P49336 464 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
CSTF3-202ENST00000431742 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 SLC10A4Q96EP9 437 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
CSTF3-202ENST00000431742 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
CSTF3-202ENST00000431742 ZBTB48P10074 688 aaPredicted RBP17.13■□□□□ 0.33
CSTF3-202ENST00000431742 ECE1P42892 770 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 VEGFBP49765 207 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 ERO1BQ86YB8 467 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 ZBTB21Q9ULJ3 1066 aa17.13■□□□□ 0.33
CSTF3-202ENST00000431742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
CSTF3-202ENST00000431742 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
CSTF3-202ENST00000431742 GDF11O95390 407 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 ASNSP08243 561 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 FGRP09769 529 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 PPIL2Q13356 520 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
CSTF3-202ENST00000431742 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
CSTF3-202ENST00000431742 TACC3Q9Y6A5 838 aa17.12■□□□□ 0.33
CSTF3-202ENST00000431742 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
CSTF3-202ENST00000431742 PTPRAP18433 802 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 RASA1P20936 1047 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 CTDSPL2Q05D32 466 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 PPATQ06203 517 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 NOGQ13253 232 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
CSTF3-202ENST00000431742 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 CTNNA3Q9UI47 895 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
CSTF3-202ENST00000431742 PLIN4Q96Q06 1357 aa17.11■□□□□ 0.33
CSTF3-202ENST00000431742 GH2P01242 217 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 AKR1B1P15121 316 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 HAND2P61296 217 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 PDE4BQ07343 736 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 TBC1D10CQ8IV04 446 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 OTUD5Q96G74 571 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
CSTF3-202ENST00000431742 ORC4O43929 436 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 AOC2O75106 756 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
CSTF3-202ENST00000431742 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
CSTF3-202ENST00000431742 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
CSTF3-202ENST00000431742 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 TBC1D2Q9BYX2 928 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 KCNH4Q9UQ05 1017 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
CSTF3-202ENST00000431742 ZHX2Q9Y6X8 837 aa17.09■□□□□ 0.33
CSTF3-202ENST00000431742 PARP14Q460N5 1801 aa17.08■□□□□ 0.33
CSTF3-202ENST00000431742 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 ZNF213O14771 459 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 IRF6O14896 467 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 PRDM1O75626 825 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
CSTF3-202ENST00000431742 MAP2K2P36507 400 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 GRM1Q13255 1194 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 WDR18Q9BV38 432 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
CSTF3-202ENST00000431742 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
CSTF3-202ENST00000431742 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
CSTF3-202ENST00000431742 PCNTO95613 3336 aa17.07■□□□□ 0.32
CSTF3-202ENST00000431742 CYP21A2P08686 494 aa17.07■□□□□ 0.32
CSTF3-202ENST00000431742 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
CSTF3-202ENST00000431742 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
CSTF3-202ENST00000431742 SEPT2Q15019 361 aa17.07■□□□□ 0.32
CSTF3-202ENST00000431742 MS4A4AQ96JQ5 239 aa17.07■□□□□ 0.32
CSTF3-202ENST00000431742 CABP5Q9NP86 173 aa17.07■□□□□ 0.32
CSTF3-202ENST00000431742 NEDD4P46934 1319 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 IGKV6D-41A0A0C4DH26 115 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
CSTF3-202ENST00000431742 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
CSTF3-202ENST00000431742 MPHOSPH10O00566 681 aaKnown RBP17.06■□□□□ 0.32
CSTF3-202ENST00000431742 CXCL11O14625 94 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
CSTF3-202ENST00000431742 AS3MTQ9HBK9 375 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
CSTF3-202ENST00000431742 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
CSTF3-202ENST00000431742 REC8O95072 547 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 NT5C2P49902 561 aa17.05■□□□□ 0.32
CSTF3-202ENST00000431742 GTF2A2P52657 109 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms