RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 KIAA1211Q6ZU35 1233 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 CNKSR2Q8WXI2 1034 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 CCDC17Q96LX7 622 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 GDF11O95390 407 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 GJA5P36382 358 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 PTH1RQ03431 593 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 PDE4BQ07343 736 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 PPIL2Q13356 520 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 ABCB5Q2M3G0 1257 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 OTUD5Q96G74 571 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 MKNK2Q9HBH9 465 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 ZHX2Q9Y6X8 837 aa21.92■■□□□ 1.1
RFTN1-202ENST00000431547 AOC2O75106 756 aa21.91■■□□□ 1.1
RFTN1-202ENST00000431547 MAP4K1Q92918 833 aa21.91■■□□□ 1.1
RFTN1-202ENST00000431547 TBC1D2Q9BYX2 928 aa21.91■■□□□ 1.1
RFTN1-202ENST00000431547 CABP5Q9NP86 173 aa21.91■■□□□ 1.1
RFTN1-202ENST00000431547 ZBTB21Q9ULJ3 1066 aa21.91■■□□□ 1.1
RFTN1-202ENST00000431547 U3KPZ7 1027 aaPredicted RBP21.91■■□□□ 1.1
RFTN1-202ENST00000431547 USP17L5A8MUK1 530 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 ZNF213O14771 459 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 GH2P01242 217 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 FGRP09769 529 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 KIF23Q02241 960 aaPredicted RBP21.9■■□□□ 1.1
RFTN1-202ENST00000431547 CTDSPL2Q05D32 466 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 SHROOM1Q2M3G4 852 aaPredicted RBP21.9■■□□□ 1.1
RFTN1-202ENST00000431547 STK11IPQ8N1F8 1099 aa21.9■■□□□ 1.1
RFTN1-202ENST00000431547 LSG1Q9H089 658 aaKnown RBP21.9■■□□□ 1.1
RFTN1-202ENST00000431547 IRF6O14896 467 aa21.89■■□□□ 1.09
RFTN1-202ENST00000431547 RASA1P20936 1047 aa21.89■■□□□ 1.09
RFTN1-202ENST00000431547 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 IMMTQ16891 758 aaKnown RBP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 REM2Q8IYK8 340 aaPredicted RBP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 ZNF444Q8N0Y2 327 aaPredicted RBP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 ZIC5Q96T25 663 aa21.89■■□□□ 1.09
RFTN1-202ENST00000431547 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 KCNH4Q9UQ05 1017 aa21.89■■□□□ 1.09
RFTN1-202ENST00000431547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.89■■□□□ 1.09
RFTN1-202ENST00000431547 AFG3L2Q9Y4W6 797 aa21.89■■□□□ 1.09
RFTN1-202ENST00000431547 OTOFQ9HC10 1997 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 BAZ2AQ9UIF9 1905 aaKnown RBP21.88■■□□□ 1.09
RFTN1-202ENST00000431547 MANSC4A6NHS7 340 aaPredicted RBP21.88■■□□□ 1.09
RFTN1-202ENST00000431547 CXCL11O14625 94 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 AKR1B1P15121 316 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 GTF2A2P52657 109 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 INHBEP58166 350 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 HAND2P61296 217 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 TMEM179Q6ZVK1 233 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 WDR18Q9BV38 432 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 ANO2Q9NQ90 1003 aa21.88■■□□□ 1.09
RFTN1-202ENST00000431547 MPHOSPH10O00566 681 aaKnown RBP21.87■■□□□ 1.09
RFTN1-202ENST00000431547 ORC4O43929 436 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 PRDM1O75626 825 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 PCP11498 1178 aaKnown RBP21.87■■□□□ 1.09
RFTN1-202ENST00000431547 GUCY1A2P33402 732 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
RFTN1-202ENST00000431547 JMYQ8N9B5 988 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 ZNF280CQ8ND82 737 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 MS4A4AQ96JQ5 239 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 NBPF3Q9H094 633 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 AS3MTQ9HBK9 375 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 TACC3Q9Y6A5 838 aa21.87■■□□□ 1.09
RFTN1-202ENST00000431547 TESPA1A2RU30 521 aaPredicted RBP21.86■■□□□ 1.09
RFTN1-202ENST00000431547 TM4SF4P48230 202 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 SNAPC2Q13487 334 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 RAB3GAP1Q15042 981 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 AKNAD1Q5T1N1 836 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 STAG1Q8WVM7 1258 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 RNF41Q9H4P4 317 aaPredicted RBP21.86■■□□□ 1.09
RFTN1-202ENST00000431547 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
RFTN1-202ENST00000431547 RBM8AQ9Y5S9 174 aaKnown RBP21.86■■□□□ 1.09
RFTN1-202ENST00000431547 SREBF2Q12772 1141 aa21.85■■□□□ 1.09
RFTN1-202ENST00000431547 SPP2Q13103 211 aa21.85■■□□□ 1.09
RFTN1-202ENST00000431547 SEPT2Q15019 361 aa21.85■■□□□ 1.09
RFTN1-202ENST00000431547 MFSD6Q6ZSS7 791 aa21.85■■□□□ 1.09
RFTN1-202ENST00000431547 TBC1D10CQ8IV04 446 aa21.85■■□□□ 1.09
RFTN1-202ENST00000431547 CETPP11597 493 aa21.84■■□□□ 1.09
RFTN1-202ENST00000431547 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.84■■□□□ 1.09
RFTN1-202ENST00000431547 KANSL2Q9H9L4 492 aa21.84■■□□□ 1.09
RFTN1-202ENST00000431547 TRIM75PA6NK02 468 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 REC8O95072 547 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 CYP21A2P08686 494 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 NT5C2P49902 561 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 TFAP4Q01664 338 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 NECTIN1Q15223 517 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 NEDD1Q8NHV4 660 aa21.83■■□□□ 1.09
RFTN1-202ENST00000431547 DOCK1Q14185 1865 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 CCL15-CCL14A0A0B4J2E2 113 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 A0A0G2JLL6 359 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-202ENST00000431547 TSPY3P0CV98 308 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 TSPY8P0CW00 308 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 BACE1P56817 501 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 MAP2K1Q02750 393 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-202ENST00000431547 CCL15Q16663 113 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 FAM47AQ5JRC9 791 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 PRRT2Q7Z6L0 340 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-202ENST00000431547 SIAH1Q8IUQ4 282 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 BRI3BPQ8WY22 251 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 TOMM22Q9NS69 142 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 LAMB1P07942 1786 aa21.82■■□□□ 1.08
RFTN1-202ENST00000431547 THSD7BQ9C0I4 1608 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms