RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ENTPD3O75355 529 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 GMPSP49915 693 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 SART3Q15020 963 aaKnown RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 ME3Q16798 604 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 C16orf86Q6ZW13 317 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 SPRYD3Q8NCJ5 442 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 DHX36Q9H2U1 1008 aaKnown RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 FAM198AQ9UFP1 575 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 ANGEL1Q9UNK9 670 aaKnown RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 CASP8AP2Q9UKL3 1982 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 SH2B2O14492 632 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 LARGE1O95461 756 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 SPDYE2Q495Y8 402 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 IGDCC4Q8TDY8 1250 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 ZNF274Q96GC6 653 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-206ENST00000431390 MYOZ2Q9NPC6 264 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 TAOK2Q9UL54 1235 aa21.44■■□□□ 1.02
HMGN1-206ENST00000431390 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
HMGN1-206ENST00000431390 HLA-DOAP06340 250 aa21.43■■□□□ 1.02
HMGN1-206ENST00000431390 LIFRP42702 1097 aa21.43■■□□□ 1.02
HMGN1-206ENST00000431390 SLC4A8Q2Y0W8 1093 aa21.43■■□□□ 1.02
HMGN1-206ENST00000431390 DYNLL2Q96FJ2 89 aa21.43■■□□□ 1.02
HMGN1-206ENST00000431390 GLIS2Q9BZE0 524 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-206ENST00000431390 MYH8P13535 1937 aa21.43■■□□□ 1.02
HMGN1-206ENST00000431390 CCDC85CA6NKD9 419 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 MYO1BO43795 1136 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 RANBP6O60518 1105 aaKnown RBP21.42■■□□□ 1.02
HMGN1-206ENST00000431390 PRDM1O75626 825 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 CACNB3P54284 484 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 APOBRQ0VD83 1088 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 FKBP1CQ5VVH2 108 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 SAPCD2Q86UD0 394 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 SGMS1Q86VZ5 419 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-206ENST00000431390 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
HMGN1-206ENST00000431390 ZNF70Q9UC06 446 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-206ENST00000431390 ATRNL1Q5VV63 1379 aa21.42■■□□□ 1.02
HMGN1-206ENST00000431390 ERICH2A1L162 156 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 IFIT3O14879 490 aaKnown RBP21.41■■□□□ 1.02
HMGN1-206ENST00000431390 GABPAQ06546 454 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 TMEM67Q5HYA8 995 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 IQCA1Q86XH1 822 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 MICALL2Q8IY33 904 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 UBAC1Q9BSL1 405 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 EHD4Q9H223 541 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 CNOT7Q9UIV1 285 aaKnown RBP21.41■■□□□ 1.02
HMGN1-206ENST00000431390 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.41■■□□□ 1.02
HMGN1-206ENST00000431390 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
HMGN1-206ENST00000431390 WNT10BO00744 389 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 DDIT3P35638 169 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 MAP2K2P36507 400 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 CDK8P49336 464 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 TMTC2Q8N394 836 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 ZNF408Q9H9D4 720 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 LY9Q9HBG7 655 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 GPHNQ9NQX3 736 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-206ENST00000431390 FOXD4L1Q9NU39 408 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 SWAP70Q9UH65 585 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 SERPINB13Q9UIV8 391 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 PFKFB2O60825 505 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 TCP10Q12799 353 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 ZNF444Q8N0Y2 327 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-206ENST00000431390 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 CHMP4CQ96CF2 233 aa21.4■■□□□ 1.02
HMGN1-206ENST00000431390 POLR2AP24928 1970 aaKnown RBP21.39■■□□□ 1.01
HMGN1-206ENST00000431390 SHTN1A0MZ66 631 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 TSPY2A6NKD2 308 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-206ENST00000431390 ST3GAL1Q11201 340 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 WTAPQ15007 396 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 CCDC83Q8IWF9 413 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 ZFPM1Q8IX07 1006 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 TRPM4Q8TD43 1214 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 ZSCAN10Q96SZ4 725 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-206ENST00000431390 PI4KBQ9UBF8 816 aa21.39■■□□□ 1.01
HMGN1-206ENST00000431390 CIZ1Q9ULV3 898 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-206ENST00000431390 TNKSO95271 1327 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 KLF18A0A0U1RQI7 1052 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 CLRN2A0PK11 232 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 RASA1P20936 1047 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 PDIA3P30101 505 aaKnown RBP21.38■■□□□ 1.01
HMGN1-206ENST00000431390 SEC23AQ15436 765 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 CCDC178Q5BJE1 867 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 FAM83AQ86UY5 434 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 SLC44A5Q8NCS7 719 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 FAM151AQ8WW52 585 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 PGAP2Q9UHJ9 254 aa21.38■■□□□ 1.01
HMGN1-206ENST00000431390 DDTLA6NHG4 134 aaPredicted RBP21.37■■□□□ 1.01
HMGN1-206ENST00000431390 H7C1D1 291 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 TFAP4Q01664 338 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 STK3Q13188 491 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 NBPF9Q3BBW0 867 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 ZKSCAN3Q9BRR0 538 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 TCP11L1Q9NUJ3 509 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 BRPF3Q9ULD4 1205 aa21.37■■□□□ 1.01
HMGN1-206ENST00000431390 TCP10L2B9ZVM9 353 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 FAM47AQ5JRC9 791 aa21.36■■□□□ 1.01
HMGN1-206ENST00000431390 SH3BP5LQ7L8J4 393 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms