RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TAF1CQ15572 869 aaPredicted RBP8.49□□□□□ -1.05
PTPN4-204ENST00000431283 MEI1Q5TIA1 1274 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 PRAMEF13Q5VWM6 474 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 COX4I2Q96KJ9 171 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 PRDM7Q9NQW5 492 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
PTPN4-204ENST00000431283 CBX7O95931 251 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
PTPN4-204ENST00000431283 PGRP06401 933 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 CDK8P49336 464 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
PTPN4-204ENST00000431283 HSPA12BQ96MM6 686 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
PTPN4-204ENST00000431283 RNF19AQ9NV58 838 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 LMCD1Q9NZU5 365 aa8.48□□□□□ -1.05
PTPN4-204ENST00000431283 BPNT1O95861 308 aa8.47□□□□□ -1.05
PTPN4-204ENST00000431283 ST13P50502 369 aaKnown RBP8.47□□□□□ -1.05
PTPN4-204ENST00000431283 DAB2P98082 770 aa8.47□□□□□ -1.05
PTPN4-204ENST00000431283 TMEM40Q8WWA1 233 aa8.47□□□□□ -1.05
PTPN4-204ENST00000431283 H3BS24 57 aa8.46□□□□□ -1.06
PTPN4-204ENST00000431283 GFRA2O00451 464 aa8.46□□□□□ -1.06
PTPN4-204ENST00000431283 ETV3P41162 512 aa8.46□□□□□ -1.06
PTPN4-204ENST00000431283 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.06
PTPN4-204ENST00000431283 PRR33A8MZF0 331 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 ZNF865P0CJ78 1059 aaPredicted RBP8.45□□□□□ -1.06
PTPN4-204ENST00000431283 KIR3DL1P43629 444 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 RPL6Q02878 288 aaKnown RBP8.45□□□□□ -1.06
PTPN4-204ENST00000431283 PKN1Q16512 942 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 KCNMB1Q16558 191 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 SLC6A19Q695T7 634 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 FLAD1Q8NFF5 587 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 CARS2Q9HA77 564 aaKnown RBP8.45□□□□□ -1.06
PTPN4-204ENST00000431283 ATP13A1Q9HD20 1204 aa8.45□□□□□ -1.06
PTPN4-204ENST00000431283 SORBS3O60504 671 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 FARP2O94887 1054 aaPredicted RBP8.44□□□□□ -1.06
PTPN4-204ENST00000431283 C8AP07357 584 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 TFE3P19532 575 aaPredicted RBP8.44□□□□□ -1.06
PTPN4-204ENST00000431283 AFMP43652 599 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 TMC4Q7Z404 712 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 ZSWIM9Q86XI8 627 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
PTPN4-204ENST00000431283 CCDC120Q96HB5 630 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 TMEM87BQ96K49 555 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 DPH2Q9BQC3 489 aaPredicted RBP8.44□□□□□ -1.06
PTPN4-204ENST00000431283 VTI1BQ9UEU0 232 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 TLR6Q9Y2C9 796 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
PTPN4-204ENST00000431283 THAP5Q7Z6K1 395 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 CDH24Q86UP0 819 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 KSR1Q8IVT5 923 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 RIN3Q8TB24 985 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 CRELD1Q96HD1 420 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 SLC38A3Q99624 504 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 FAM53CQ9NYF3 392 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 TJP2Q9UDY2 1190 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
PTPN4-204ENST00000431283 ERCC3P19447 782 aa8.42□□□□□ -1.06
PTPN4-204ENST00000431283 ZNF648Q5T619 568 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-204ENST00000431283 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
PTPN4-204ENST00000431283 SEMA3GQ9NS98 782 aa8.42□□□□□ -1.06
PTPN4-204ENST00000431283 ZSWIM5Q9P217 1185 aa8.42□□□□□ -1.06
PTPN4-204ENST00000431283 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
PTPN4-204ENST00000431283 PLCG1P19174 1290 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 YARSP54577 528 aaKnown RBP8.41□□□□□ -1.06
PTPN4-204ENST00000431283 PWP1Q13610 501 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 DNAJC14Q6Y2X3 702 aaPredicted RBP8.41□□□□□ -1.06
PTPN4-204ENST00000431283 CCDC84Q86UT8 332 aaPredicted RBP8.41□□□□□ -1.06
PTPN4-204ENST00000431283 RELL1Q8IUW5 271 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 MCATQ8IVS2 390 aaKnown RBP8.41□□□□□ -1.06
PTPN4-204ENST00000431283 PHC3Q8NDX5 983 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 UBE2FQ969M7 185 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 CTNND2Q9UQB3 1225 aa8.41□□□□□ -1.06
PTPN4-204ENST00000431283 USP31Q70CQ4 1352 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 FZD5Q13467 585 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 FAM13CQ8NE31 585 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 PIWIL2Q8TC59 973 aaKnown RBP8.4□□□□□ -1.06
PTPN4-204ENST00000431283 ST14Q9Y5Y6 855 aa8.4□□□□□ -1.06
PTPN4-204ENST00000431283 GBP2P32456 591 aaPredicted RBP8.39□□□□□ -1.07
PTPN4-204ENST00000431283 MPZL3Q6UWV2 235 aa8.39□□□□□ -1.07
PTPN4-204ENST00000431283 F6X3S4 739 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 RAC2P15153 192 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 LMNB2Q03252 620 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 TNK2Q07912 1038 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 CAMK2GQ13555 558 aaPredicted RBP8.38□□□□□ -1.07
PTPN4-204ENST00000431283 TMPRSS7Q7RTY8 843 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 FBXO33Q7Z6M2 555 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
PTPN4-204ENST00000431283 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 TRIT1Q9H3H1 467 aaKnown RBP8.38□□□□□ -1.07
PTPN4-204ENST00000431283 CEP131Q9UPN4 1083 aa8.38□□□□□ -1.07
PTPN4-204ENST00000431283 CTSHP09668 335 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms