RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 FLT1P17948 1338 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 CDK8P49336 464 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 FANCBQ8NB91 859 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-205ENST00000431183 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
SMPD4-205ENST00000431183 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.31
SMPD4-205ENST00000431183 ZNF526Q8TF50 670 aaPredicted RBP13.08□□□□□ -0.31
SMPD4-205ENST00000431183 TAOK3Q9H2K8 898 aa13.08□□□□□ -0.31
SMPD4-205ENST00000431183 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
SMPD4-205ENST00000431183 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMPD4-205ENST00000431183 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
SMPD4-205ENST00000431183 KRT40Q6A162 431 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 USP28Q96RU2 1077 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 NUP88Q99567 741 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-205ENST00000431183 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
SMPD4-205ENST00000431183 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 AKR1B1P15121 316 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 BIN1O00499 593 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 CREBRFQ8IUR6 639 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 CEP95Q96GE4 821 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 TMEM87BQ96K49 555 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 TMEM63CQ9P1W3 806 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-205ENST00000431183 EGFRP00533 1210 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 DDIT3P35638 169 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 NLRP5P59047 1200 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
SMPD4-205ENST00000431183 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-205ENST00000431183 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
SMPD4-205ENST00000431183 ARPP21Q9UBL0 812 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-205ENST00000431183 TPM2P07951 284 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 C12orf60Q5U649 245 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.321e-11■■■■■ 41.1
SMPD4-205ENST00000431183 TMEM39BQ9GZU3 492 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 A0A1B0GVL5 298 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 ASTN2O75129 1339 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-205ENST00000431183 NHSQ6T4R5 1651 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 IL1R1P14778 569 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 KCNB2Q92953 911 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-205ENST00000431183 MTFR1LQ9H019 292 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
SMPD4-205ENST00000431183 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 CXCL9Q07325 125 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SMPD4-205ENST00000431183 PLIN2Q99541 437 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 SDF4Q9BRK5 362 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-205ENST00000431183 PDCL3Q9H2J4 239 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 MYH3P11055 1940 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 LIG1P18858 919 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 DIS3L2Q8IYB7 885 aaKnown RBP13.05□□□□□ -0.32
SMPD4-205ENST00000431183 DACT1Q9NYF0 836 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 CDKL5O76039 1030 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 GPR162Q16538 588 aa13.05□□□□□ -0.32
SMPD4-205ENST00000431183 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
SMPD4-205ENST00000431183 PLCG2P16885 1265 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
SMPD4-205ENST00000431183 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
SMPD4-205ENST00000431183 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 RHBDL3P58872 404 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 APOBEC3HQ6NTF7 200 aaKnown RBP13.04□□□□□ -0.32
SMPD4-205ENST00000431183 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
SMPD4-205ENST00000431183 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
SMPD4-205ENST00000431183 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-205ENST00000431183 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 SEPT2Q15019 361 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 ZNF174Q15697 407 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 USH1GQ495M9 461 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 FEZ1Q99689 392 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms