RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 HMGCRP04035 888 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 CYP7A1P22680 504 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 MTMR2Q13614 643 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
GCSHP3-201ENST00000431120 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 TFRCP02786 760 aaKnown RBP16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 MS4A1P11836 297 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 RLBP1P12271 317 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 DEFB118Q96PH6 123 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 EHD4Q9H223 541 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.24
GCSHP3-201ENST00000431120 XRCC5P13010 732 aaKnown RBP16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 SIPA1L1O43166 1804 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
GCSHP3-201ENST00000431120 RPTORQ8N122 1335 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 MAPK4P31152 587 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 HERVK_113P62684 666 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 TLR7Q9NYK1 1049 aaKnown RBP16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
GCSHP3-201ENST00000431120 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 USP5P45974 858 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 RANBP2P49792 3224 aaKnown RBP16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 JAG1P78504 1218 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 NECAB2Q7Z6G3 386 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 HMX1Q9NP08 348 aaPredicted RBP16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
GCSHP3-201ENST00000431120 CDK5RAP2Q96SN8 1893 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 EVI5O60447 810 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 GDF11O95390 407 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 USP14P54578 494 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 AACSQ86V21 672 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 PRO3102Q9H379 93 aa16.48■□□□□ 0.23
GCSHP3-201ENST00000431120 GH2P01242 217 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L15C9J2P7 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L13C9JLJ4 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L11C9JVI0 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L18D6R9N7 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L22D6RA61 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L17D6RBQ6 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L19D6RCP7 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L20D6RJB6 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 HMMRO75330 724 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 ERVK-24P63145 666 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 USP17L24Q0WX57 530 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 MIER1Q8N108 512 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 KIF1BPQ96EK5 621 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 KIAA1683Q9H0B3 1180 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 CHMP4BQ9H444 224 aaKnown RBP16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 ANTXR1Q9H6X2 564 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 TXNRD2Q9NNW7 524 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 CABP5Q9NP86 173 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
GCSHP3-201ENST00000431120 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.22
GCSHP3-201ENST00000431120 GLRX3O76003 335 aaKnown RBP16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 CCNA1P78396 465 aa16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 TRIB2Q92519 343 aa16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 PAWRQ96IZ0 340 aaKnown RBP16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 FEZ1Q99689 392 aa16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 MYH1P12882 1939 aa16.45■□□□□ 0.22
GCSHP3-201ENST00000431120 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
GCSHP3-201ENST00000431120 CYP2B6P20813 491 aa16.44■□□□□ 0.22
GCSHP3-201ENST00000431120 RGS2P41220 211 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms