RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 MROH5Q6ZUA9 1318 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 MS4A1P11836 297 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 DNAJB2P25686 324 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-212ENST00000430617 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
ATG4B-212ENST00000430617 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 ALYREFQ86V81 257 aaKnown RBP12.48□□□□□ -0.41
ATG4B-212ENST00000430617 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
ATG4B-212ENST00000430617 VGLL2Q8N8G2 317 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 SOCS4Q8WXH5 440 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
ATG4B-212ENST00000430617 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 TRANK1O15050 2925 aa12.48□□□□□ -0.41
ATG4B-212ENST00000430617 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 DNM1LO00429 736 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 PRDX5P30044 214 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-212ENST00000430617 Q3C1V9 767 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 TRIM60Q495X7 471 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 MORN1Q5T089 497 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 GJC2Q5T442 439 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-212ENST00000430617 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
ATG4B-212ENST00000430617 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 KAZALD1Q96I82 304 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
ATG4B-212ENST00000430617 PORCNQ9H237 461 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 EPHX3Q9H6B9 360 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
ATG4B-212ENST00000430617 F6X3S4 739 aa12.46□□□□□ -0.41
ATG4B-212ENST00000430617 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
ATG4B-212ENST00000430617 ZSCAN29Q8IWY8 852 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-212ENST00000430617 LPAR1Q92633 364 aa12.46□□□□□ -0.41
ATG4B-212ENST00000430617 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
ATG4B-212ENST00000430617 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
ATG4B-212ENST00000430617 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
ATG4B-212ENST00000430617 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
ATG4B-212ENST00000430617 GRM8O00222 908 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 ENTPD3O75355 529 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 PDE8BO95263 885 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 BMP1P13497 986 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 RGS2P41220 211 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 ADGRE1Q14246 886 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
ATG4B-212ENST00000430617 SNX17Q15036 470 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 ZNF280CQ8ND82 737 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 TRPV1Q8NER1 839 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 APBA2Q99767 749 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
ATG4B-212ENST00000430617 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 CNGA1P29973 690 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 PBX2P40425 430 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 PABPC4Q13310 644 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATG4B-212ENST00000430617 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 GAS2L1Q99501 681 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-212ENST00000430617 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
ATG4B-212ENST00000430617 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
ATG4B-212ENST00000430617 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-212ENST00000430617 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-212ENST00000430617 FGFR2P21802 821 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 MAPK4P31152 587 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 HERVK_113P62684 666 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 C11orf16Q9NQ32 467 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 DDX19BQ9UMR2 479 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
ATG4B-212ENST00000430617 KCNQ1P51787 676 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 ERVK-24P63145 666 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-212ENST00000430617 TFF2Q03403 129 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 PICALMQ13492 652 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 AAMPQ13685 434 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 ANO1Q5XXA6 986 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 IL27Q8NEV9 243 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
ATG4B-212ENST00000430617 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 UTYO14607 1347 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 TBC1D12O60347 775 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 LDHBP07195 334 aaKnown RBP12.41□□□□□ -0.42
ATG4B-212ENST00000430617 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-212ENST00000430617 CYP2C19P33261 490 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 TLE2Q04725 743 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 MTMR2Q13614 643 aa12.41□□□□□ -0.42
ATG4B-212ENST00000430617 MFSD14CQ5VZR4 134 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms