RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 MAP3K7O43318 606 aa18.16■□□□□ 0.5
RIF1-204ENST00000430328 IFT122Q9HBG6 1241 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 BRD3Q15059 726 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 TMTC1Q8IUR5 882 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 TEKT1Q969V4 418 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 UQCRFS1P1P0C7P4 283 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 GRK7Q8WTQ7 553 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 CARD10Q9BWT7 1032 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
RIF1-204ENST00000430328 TRIM42Q8IWZ5 723 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 RNASELQ05823 741 aaKnown RBP18.15■□□□□ 0.5
RIF1-204ENST00000430328 ARHGDIAP52565 204 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 STRN3Q13033 797 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 PSMB7Q99436 277 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
RIF1-204ENST00000430328 HARSP12081 509 aaKnown RBP18.14■□□□□ 0.5
RIF1-204ENST00000430328 PPP1R12AO14974 1030 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 PDE6AP16499 860 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 THAP12O43422 761 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 GARSP41250 739 aaKnown RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 PMS1P54277 932 aaKnown RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 ST13P4Q8IZP2 240 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 LRRC2Q9BYS8 371 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 SKA2Q8WVK7 121 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 GSTA4O15217 222 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 ATP1A2P50993 1020 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 SLMAPQ14BN4 828 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 PPP2R5AQ15172 486 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 PROSER2Q86WR7 435 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 N4BP2L2Q92802 583 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.49
RIF1-204ENST00000430328 EXOC7Q9UPT5 735 aa18.14■□□□□ 0.49
RIF1-204ENST00000430328 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 A0A1B0GW55 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L2P0CJ85 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L3P0CJ86 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L4P0CJ87 422 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L5P0CJ88 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L6P0CJ89 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4L7P0CJ90 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DUX4Q9UBX2 424 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 GPC4O75487 556 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 LMNB1P20700 586 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 PLCD1P51178 756 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 GUCY2FP51841 1108 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DAB2P98082 770 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 TNNI2P48788 182 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
RIF1-204ENST00000430328 CEP70Q8NHQ1 597 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 KRT8P05787 483 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 SLC4A4Q9Y6R1 1079 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 DDX42Q86XP3 938 aaKnown RBP eCLIP18.13■□□□□ 0.49
RIF1-204ENST00000430328 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 MCMDC2Q4G0Z9 681 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 KIAA2013Q8IYS2 634 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 SNRKQ9NRH2 765 aa18.13■□□□□ 0.49
RIF1-204ENST00000430328 S100BP04271 92 aaPredicted RBP18.12■□□□□ 0.49
RIF1-204ENST00000430328 MCF2P10911 925 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 RCN2Q14257 317 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 AMFRQ9UKV5 643 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 CDV3Q9UKY7 258 aaKnown RBP18.12■□□□□ 0.49
RIF1-204ENST00000430328 CREB3O43889 395 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 ECE1P42892 770 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 ARHGAP44Q17R89 818 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 CABP1Q9NZU7 370 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 CCDC169A6NNP5 214 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 KRT81Q14533 505 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 LONRF2Q1L5Z9 754 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 NR1H4Q96RI1 486 aaPredicted RBP18.12■□□□□ 0.49
RIF1-204ENST00000430328 ANGPTL2Q9UKU9 493 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 STX1BP61266 288 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 DCLK2Q8N568 766 aa18.12■□□□□ 0.49
RIF1-204ENST00000430328 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 ZNF449Q6P9G9 518 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 DBF4Q9UBU7 674 aaPredicted RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 SAR1BQ9Y6B6 198 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 EFCAB14O75071 495 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 PLIN2Q99541 437 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 NVLO15381 856 aaKnown RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 ZSCAN32Q9NX65 697 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 SYCE1LA8MT33 242 aa18.11■□□□□ 0.49
RIF1-204ENST00000430328 RARSP54136 660 aaKnown RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 TRMT10CQ7L0Y3 403 aaKnown RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 PACSIN2Q9UNF0 486 aaPredicted RBP18.11■□□□□ 0.49
RIF1-204ENST00000430328 OATP04181 439 aa18.1■□□□□ 0.49
RIF1-204ENST00000430328 CYP7A1P22680 504 aa18.1■□□□□ 0.49
RIF1-204ENST00000430328 PDE4DQ08499 809 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms