RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 C1orf115Q9H7X2 142 aa18.43■□□□□ 0.54
TOP3B-204ENST00000430142 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
TOP3B-204ENST00000430142 MORF4L1Q9UBU8 362 aa18.43■□□□□ 0.54
TOP3B-204ENST00000430142 GDF11O95390 407 aa18.42■□□□□ 0.54
TOP3B-204ENST00000430142 HOXA7P31268 230 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 DYNLL1P63167 89 aaKnown RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 ZNF512BQ96KM6 892 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 TRIM34Q9BYJ4 488 aa18.42■□□□□ 0.54
TOP3B-204ENST00000430142 PIH1D3Q9NQM4 214 aaKnown RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
TOP3B-204ENST00000430142 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
TOP3B-204ENST00000430142 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
TOP3B-204ENST00000430142 NECAB2Q7Z6G3 386 aa18.41■□□□□ 0.54
TOP3B-204ENST00000430142 TXNRD2Q9NNW7 524 aa18.41■□□□□ 0.54
TOP3B-204ENST00000430142 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
TOP3B-204ENST00000430142 RPTORQ8N122 1335 aa18.41■□□□□ 0.54
TOP3B-204ENST00000430142 C19orf81C9J6K1 198 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 CYP2B6P20813 491 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 HERVK_113P62684 666 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 GPRC5AQ8NFJ5 357 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
TOP3B-204ENST00000430142 TLR7Q9NYK1 1049 aaKnown RBP18.4■□□□□ 0.54
TOP3B-204ENST00000430142 STAP2Q9UGK3 403 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 DBNLQ9UJU6 430 aaKnown RBP18.4■□□□□ 0.54
TOP3B-204ENST00000430142 ZBTB21Q9ULJ3 1066 aa18.4■□□□□ 0.54
TOP3B-204ENST00000430142 CYP7A1P22680 504 aa18.39■□□□□ 0.53
TOP3B-204ENST00000430142 ANKLE1Q8NAG6 615 aa18.39■□□□□ 0.53
TOP3B-204ENST00000430142 TRIB2Q92519 343 aa18.39■□□□□ 0.53
TOP3B-204ENST00000430142 GINM1Q9NU53 330 aa18.39■□□□□ 0.53
TOP3B-204ENST00000430142 RBPJLQ9UBG7 517 aa18.39■□□□□ 0.53
TOP3B-204ENST00000430142 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.53
TOP3B-204ENST00000430142 MAST2Q6P0Q8 1798 aa18.38■□□□□ 0.53
TOP3B-204ENST00000430142 HLA-DOAP06340 250 aa18.38■□□□□ 0.53
TOP3B-204ENST00000430142 Q3C1V9 767 aa18.38■□□□□ 0.53
TOP3B-204ENST00000430142 EAF2Q96CJ1 260 aaPredicted RBP18.38■□□□□ 0.53
TOP3B-204ENST00000430142 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
TOP3B-204ENST00000430142 IGSF3O75054 1194 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
TOP3B-204ENST00000430142 MNX1P50219 401 aaPredicted RBP18.37■□□□□ 0.53
TOP3B-204ENST00000430142 POTEEQ6S8J3 1075 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 MIGA1Q8NAN2 632 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 NUDT12Q9BQG2 462 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 PLXNB2O15031 1838 aa18.37■□□□□ 0.53
TOP3B-204ENST00000430142 A0A1W2PPC1 479 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 SOX1O00570 391 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-204ENST00000430142 GH2P01242 217 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 RLBP1P12271 317 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 MAP3K21Q5TCX8 1036 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
TOP3B-204ENST00000430142 C7orf61Q8IZ16 206 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 PORCNQ9H237 461 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
TOP3B-204ENST00000430142 MYO5AQ9Y4I1 1855 aaKnown RBP18.36■□□□□ 0.53
TOP3B-204ENST00000430142 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
TOP3B-204ENST00000430142 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
TOP3B-204ENST00000430142 MAPK4P31152 587 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 USP5P45974 858 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 ERVK-24P63145 666 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 TATDN1Q6P1N9 297 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 SOCS4Q8WXH5 440 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 USP6NLQ92738 828 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 ZMYND8Q9ULU4 1186 aaPredicted RBP18.35■□□□□ 0.53
TOP3B-204ENST00000430142 FOCADQ5VW36 1801 aa18.35■□□□□ 0.53
TOP3B-204ENST00000430142 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
TOP3B-204ENST00000430142 ALPK3Q96L96 1907 aa18.34■□□□□ 0.53
TOP3B-204ENST00000430142 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
TOP3B-204ENST00000430142 ZYXQ15942 572 aaKnown RBP18.34■□□□□ 0.53
TOP3B-204ENST00000430142 GPR142Q7Z601 462 aa18.34■□□□□ 0.53
TOP3B-204ENST00000430142 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
TOP3B-204ENST00000430142 LRCH3Q96II8 777 aa18.34■□□□□ 0.53
TOP3B-204ENST00000430142 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
TOP3B-204ENST00000430142 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
TOP3B-204ENST00000430142 CCL14Q16627 93 aa18.33■□□□□ 0.52
TOP3B-204ENST00000430142 MORN1Q5T089 497 aa18.33■□□□□ 0.52
TOP3B-204ENST00000430142 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
TOP3B-204ENST00000430142 GTF3C2Q8WUA4 911 aaPredicted RBP18.33■□□□□ 0.52
TOP3B-204ENST00000430142 GDF15Q99988 308 aa18.33■□□□□ 0.52
TOP3B-204ENST00000430142 SYN1P17600 705 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 RGS2P41220 211 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 RAB3GAP1Q15042 981 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 CERS3Q8IU89 383 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 TRMT44Q8IYL2 757 aaKnown RBP18.32■□□□□ 0.52
TOP3B-204ENST00000430142 C12orf42Q96LP6 360 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 FEZ1Q99689 392 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms