RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 C21orf2O43822 256 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 CALM1P0DP23 149 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 CALM2P0DP24 149 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 CALM3P0DP25 149 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 IFNAR1P17181 557 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 WASF1Q92558 559 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 DYNLL2Q96FJ2 89 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 TMEM63CQ9P1W3 806 aa16.64■□□□□ 0.25
CALD1-207ENST00000430085 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
CALD1-207ENST00000430085 TRIM29Q14134 588 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 STRIP1Q5VSL9 837 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 OTUD7BQ6GQQ9 843 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
CALD1-207ENST00000430085 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
CALD1-207ENST00000430085 SCNN1DP51172 638 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 PLCD1P51178 756 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 TFAP4Q01664 338 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 AOC3Q16853 763 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
CALD1-207ENST00000430085 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 NMT2O60551 498 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 DDAH1O94760 285 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
CALD1-207ENST00000430085 ZNF445P59923 1031 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 FKBP1AP62942 108 aaKnown RBP16.62■□□□□ 0.25
CALD1-207ENST00000430085 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
CALD1-207ENST00000430085 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
CALD1-207ENST00000430085 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
CALD1-207ENST00000430085 MYH15Q9Y2K3 1946 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 KCNQ5Q9NR82 932 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 DDX60LQ5H9U9 1706 aaKnown RBP16.61■□□□□ 0.25
CALD1-207ENST00000430085 SNED1Q8TER0 1413 aa16.61■□□□□ 0.25
CALD1-207ENST00000430085 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 PICALMQ13492 652 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 GJB4Q9NTQ9 266 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
CALD1-207ENST00000430085 DACT2Q5SW24 774 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 KRT40Q6A162 431 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 C16orf86Q6ZW13 317 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
CALD1-207ENST00000430085 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 MYH1P12882 1939 aa16.6■□□□□ 0.25
CALD1-207ENST00000430085 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 DEXIO95424 95 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 CRKP46108 304 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 MRE11P49959 708 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
CALD1-207ENST00000430085 TROAPQ12815 778 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
CALD1-207ENST00000430085 GPR162Q16538 588 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 DGKHQ86XP1 1220 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
CALD1-207ENST00000430085 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
CALD1-207ENST00000430085 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
CALD1-207ENST00000430085 SYCE3A1L190 88 aa16.58■□□□□ 0.25
CALD1-207ENST00000430085 CDK8P49336 464 aa16.58■□□□□ 0.25
CALD1-207ENST00000430085 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.25
CALD1-207ENST00000430085 CCDC183Q5T5S1 534 aa16.58■□□□□ 0.25
CALD1-207ENST00000430085 GAS2L3Q86XJ1 694 aa16.58■□□□□ 0.25
CALD1-207ENST00000430085 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.25
CALD1-207ENST00000430085 RASA1P20936 1047 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 ZDHHC15Q96MV8 337 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 RNF26Q9BY78 433 aaPredicted RBP16.58■□□□□ 0.24
CALD1-207ENST00000430085 GRPEL1Q9HAV7 217 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
CALD1-207ENST00000430085 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
CALD1-207ENST00000430085 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CALD1-207ENST00000430085 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
CALD1-207ENST00000430085 RCSD1Q6JBY9 416 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 APOBEC3HQ6NTF7 200 aaKnown RBP16.57■□□□□ 0.24
CALD1-207ENST00000430085 USP28Q96RU2 1077 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 PSMD1Q99460 953 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
CALD1-207ENST00000430085 KIF5BP33176 963 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms