RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PTPREP23469 700 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 PHKA1P46020 1223 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 MORC3Q14149 939 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
LINC00839-202ENST00000429940 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 KCNJ14Q9UNX9 436 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
LINC00839-202ENST00000429940 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 ATP8B1O43520 1251 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
LINC00839-202ENST00000429940 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
LINC00839-202ENST00000429940 ALX1Q15699 326 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 NAPBQ9H115 298 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
LINC00839-202ENST00000429940 PDE8BO95263 885 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 GPTP24298 496 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
LINC00839-202ENST00000429940 CTSWP56202 376 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 GRAMD1CQ8IYS0 662 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 EPB41L4AQ9HCS5 686 aaPredicted RBP17.16■□□□□ 0.34
LINC00839-202ENST00000429940 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
LINC00839-202ENST00000429940 POLR3GO15318 223 aaPredicted RBP17.15■□□□□ 0.34
LINC00839-202ENST00000429940 CHD4Q14839 1912 aa17.15■□□□□ 0.34
LINC00839-202ENST00000429940 CC2D1AQ6P1N0 951 aaPredicted RBP17.15■□□□□ 0.34
LINC00839-202ENST00000429940 TRIML1Q8N9V2 468 aa17.15■□□□□ 0.34
LINC00839-202ENST00000429940 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
LINC00839-202ENST00000429940 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
LINC00839-202ENST00000429940 FOXP1Q9H334 677 aaPredicted RBP17.15■□□□□ 0.34
LINC00839-202ENST00000429940 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
LINC00839-202ENST00000429940 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 SAMSN1Q9NSI8 373 aaKnown RBP17.14■□□□□ 0.33
LINC00839-202ENST00000429940 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 PCDHB6Q9Y5E3 794 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 NID2Q14112 1375 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 PLCD1P51178 756 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 RTN1Q16799 776 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
LINC00839-202ENST00000429940 RSRC2Q7L4I2 434 aaKnown RBP17.14■□□□□ 0.33
LINC00839-202ENST00000429940 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
LINC00839-202ENST00000429940 MED15Q96RN5 788 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 KRT23Q9C075 422 aa17.14■□□□□ 0.33
LINC00839-202ENST00000429940 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.14■□□□□ 0.33
LINC00839-202ENST00000429940 SASH3O75995 380 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 MBD4O95243 580 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 NR1I3Q14994 352 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
LINC00839-202ENST00000429940 HLFQ16534 295 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 DHX58Q96C10 678 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
LINC00839-202ENST00000429940 TACC3Q9Y6A5 838 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
LINC00839-202ENST00000429940 NR5A1Q13285 461 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 RRP12Q5JTH9 1297 aaKnown RBP17.13■□□□□ 0.33
LINC00839-202ENST00000429940 MAGEB6Q8N7X4 407 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 ZKSCAN3Q9BRR0 538 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 ARMT1Q9H993 441 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
LINC00839-202ENST00000429940 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
LINC00839-202ENST00000429940 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 AKR1B15C9JRZ8 316 aaPredicted RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 CCDC175P0C221 793 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 MTF1Q14872 753 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 GOLGA1Q92805 767 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 ARFGAP3Q9NP61 516 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 MYH3P11055 1940 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 IRS4O14654 1257 aaPredicted RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 DEXIO95424 95 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 ERCC5P28715 1186 aaPredicted RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 WTAPQ15007 396 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 CSRNP2Q9H175 543 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
LINC00839-202ENST00000429940 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
LINC00839-202ENST00000429940 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
LINC00839-202ENST00000429940 PUM3Q15397 648 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms