RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
ATG4B-211ENST00000429899 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 FLIIQ13045 1269 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-211ENST00000429899 EXOC6Q8TAG9 804 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
ATG4B-211ENST00000429899 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 PDLIM7Q9NR12 457 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
ATG4B-211ENST00000429899 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
ATG4B-211ENST00000429899 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-211ENST00000429899 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-211ENST00000429899 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-211ENST00000429899 ITGB8P26012 769 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 RGS3P49796 1198 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 HMGCS2P54868 508 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 TFF2Q03403 129 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 SPP2Q13103 211 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 ADGRE1Q14246 886 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 SLC39A5Q6ZMH5 540 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 TRMT44Q8IYL2 757 aaKnown RBP12.49□□□□□ -0.41
ATG4B-211ENST00000429899 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-211ENST00000429899 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 WDFY4Q6ZS81 3184 aa12.49□□□□□ -0.41
ATG4B-211ENST00000429899 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 MROH5Q6ZUA9 1318 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 DNM1LO00429 736 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 MS4A1P11836 297 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 CNGA1P29973 690 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 KCNQ1P51787 676 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 VGLL2Q8N8G2 317 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-211ENST00000429899 TRANK1O15050 2925 aa12.48□□□□□ -0.41
ATG4B-211ENST00000429899 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 GPR37L1O60883 481 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 PRDX5P30044 214 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 PBX2P40425 430 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 RGS2P41220 211 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 Q3C1V9 767 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 MORN1Q5T089 497 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 LPAR1Q92633 364 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 KAZALD1Q96I82 304 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 PORCNQ9H237 461 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 DDX20Q9UHI6 824 aaKnown RBP12.47□□□□□ -0.41
ATG4B-211ENST00000429899 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
ATG4B-211ENST00000429899 F6X3S4 739 aa12.46□□□□□ -0.41
ATG4B-211ENST00000429899 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-211ENST00000429899 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATG4B-211ENST00000429899 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
ATG4B-211ENST00000429899 ZSCAN29Q8IWY8 852 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-211ENST00000429899 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.41
ATG4B-211ENST00000429899 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATG4B-211ENST00000429899 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
ATG4B-211ENST00000429899 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
ATG4B-211ENST00000429899 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
ATG4B-211ENST00000429899 GRXCR1A8MXD5 290 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 GRM8O00222 908 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 ENTPD3O75355 529 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 PDE8BO95263 885 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
ATG4B-211ENST00000429899 SNX17Q15036 470 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
ATG4B-211ENST00000429899 ZNF280CQ8ND82 737 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 TRPV1Q8NER1 839 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 APBA2Q99767 749 aa12.45□□□□□ -0.42
ATG4B-211ENST00000429899 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 FPGSQ05932 587 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
ATG4B-211ENST00000429899 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
ATG4B-211ENST00000429899 MSCO60682 206 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 RAG1P15918 1043 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 FGFR2P21802 821 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 MAPK4P31152 587 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 HERVK_113P62684 666 aa12.43□□□□□ -0.42
ATG4B-211ENST00000429899 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms