RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 TDRD3Q9H7E2 651 aaKnown RBP14.73□□□□□ -0.05
PTCH1-207ENST00000429896 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 RGS12O14924 1447 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 SLC10A4Q96EP9 437 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 CYP2E1P05181 493 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-207ENST00000429896 LMNB1P20700 586 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 TFIP11Q9UBB9 837 aaKnown RBP14.73□□□□□ -0.05
PTCH1-207ENST00000429896 UTYO14607 1347 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 SLFN13Q68D06 897 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 NSMFQ6X4W1 530 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 DEF6Q9H4E7 631 aa14.73□□□□□ -0.05
PTCH1-207ENST00000429896 ARID4AP29374 1257 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 ADCY7P51828 1080 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 UBA5Q9GZZ9 404 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 CCDC97Q96F63 343 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 TNKSO95271 1327 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 SSR1P43307 286 aaKnown RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 PNMA2Q9UL42 364 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 RPAP1Q9BWH6 1393 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 KIF20AO95235 890 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 TRIM75PA6NK02 468 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 FLOT1O75955 427 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 LIG1P18858 919 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 CACNB3P54284 484 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 TICAM2Q86XR7 235 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 LRRC4BQ9NT99 713 aa14.72□□□□□ -0.05
PTCH1-207ENST00000429896 FRMPD2Q68DX3 1309 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-207ENST00000429896 KRT26Q7Z3Y9 468 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 PI4K2BQ8TCG2 481 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 KANSL2Q9H9L4 492 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 SRGNP10124 158 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 TAX1BP1Q86VP1 789 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 ZNF654Q8IZM8 581 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 ABCC6O95255 1503 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 PNMA1Q8ND90 353 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 CNNM3Q8NE01 707 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 TSG101Q99816 390 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 CNOT7Q9UIV1 285 aaKnown RBP14.71□□□□□ -0.05
PTCH1-207ENST00000429896 SEC24BO95487 1268 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 TTLL1O95922 423 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 FSIP1Q8NA03 581 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 TSPYL1Q9H0U9 437 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 ACBD3Q9H3P7 528 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 AHDC1Q5TGY3 1603 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-207ENST00000429896 ATRNO75882 1429 aa14.71□□□□□ -0.05
PTCH1-207ENST00000429896 BRDTQ58F21 947 aaPredicted RBP14.71□□□□□ -0.06
PTCH1-207ENST00000429896 ZNF341Q9BYN7 854 aa14.71□□□□□ -0.06
PTCH1-207ENST00000429896 TM6SF1Q9BZW5 370 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 SLIT2O94813 1529 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 DDAH1O94760 285 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 RSBN1LQ6PCB5 846 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 SMARCE1Q969G3 411 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 LLPHQ9BRT6 129 aaKnown RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 ABCC12Q96J65 1359 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 SLC4A9Q96Q91 983 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 AKAP12Q02952 1782 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 TMEM232C9JQI7 657 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 PSMD14O00487 310 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 MYCLP12524 364 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 STXBP4Q6ZWJ1 553 aa14.7□□□□□ -0.06
PTCH1-207ENST00000429896 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 NCOA5Q9HCD5 579 aaKnown RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 TBCAO75347 108 aaKnown RBP14.7□□□□□ -0.06
PTCH1-207ENST00000429896 MCM7P33993 719 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
PTCH1-207ENST00000429896 CFBP00751 764 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 RPS12P25398 132 aaKnown RBP14.69□□□□□ -0.06
PTCH1-207ENST00000429896 SEPT7Q16181 437 aaKnown RBP14.69□□□□□ -0.06
PTCH1-207ENST00000429896 MAP4K1Q92918 833 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 DYNLL2Q96FJ2 89 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 CAMK4Q16566 473 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 BRAPQ7Z569 592 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 KCNG4Q8TDN1 519 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 PNPLA7Q6ZV29 1317 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 CCNA1P78396 465 aa14.69□□□□□ -0.06
PTCH1-207ENST00000429896 MKRN3Q13064 507 aaKnown RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 PKD2L1Q9P0L9 805 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 MAP3K11Q16584 847 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 NOM1Q5C9Z4 860 aaKnown RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 ALAS1P13196 640 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 SP4Q02446 784 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 LETM2Q2VYF4 491 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 INTS4Q96HW7 963 aaKnown RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 GPBP1L1Q9HC44 474 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 MRPL11Q9Y3B7 192 aaKnown RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 BACH1O14867 736 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 IDEP14735 1019 aa14.68□□□□□ -0.06
PTCH1-207ENST00000429896 GMPSP49915 693 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-207ENST00000429896 KRT79Q5XKE5 535 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms